Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004652 Human Papillomavirus HPV18 NC_001357.1
 4364 4393 hg19 5 57445843 57445873 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004653 Human Papillomavirus HPV18 NC_001357.1
 6775 6803 hg19 5 57476101 57476126 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004654 Human Papillomavirus HPV18 NC_001357.1
 7390 7421 hg19 5 57455436 57455463 q11.2 RMEL3 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS10019940 Hepatitis B virus - NC_003977.1
 - - hg19 5 65582579 65582810 q12.3 PPWD1 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019945 Hepatitis B virus - NC_003977.1
 - - hg19 5 4192716 4192868 p15.33 ENSG00000299354 Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS10019987 Hepatitis B virus - NC_003977.1
 - - hg19 5 5093240 5093568 p15.32 - Nontumor Hepatocellular carcinoma de novo assembly of RNA-seq reads 24085110 2013 VISDB1.0
TVIS30003706 Human Immunodeficiency Virus - Not given - - hg19 5 13140645 13140645 p15.2 - Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003707 Human Immunodeficiency Virus - Not given - - hg19 5 17967678 17967678 p15.1 - Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003708 Human Immunodeficiency Virus - Not given - - hg19 5 18742031 18742031 p14.3 LINC02100 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0
TVIS30003709 Human Immunodeficiency Virus - Not given - - hg19 5 31537878 31537878 p13.3 C5orf22 Cell line HIV infection/AIDS QiaQuick PCR and Sequencing 23953889 2013 VISDB1.0