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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20003709 Human Papillomavirus HPV16 NC_001526.2
 1092 1171 hg19 chr7 85320223 85320223 q21.11 - Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20003790 Human Papillomavirus HPV16 NC_001526.2
 3205 3222 hg19 chr7 40001542 40001542 p14.1 CDK13 Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20003791 Human Papillomavirus HPV16 NC_001526.2
 3222 3202 hg19 chr7 40001583 40001583 p14.1 CDK13 Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20003792 Human Papillomavirus HPV16 NC_001526.2
 3511 3561 hg19 chr7 40021927 40021927 p14.1 CDK13 Tumor Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20003810 Human Papillomavirus HPV16 NC_001526.2
 560 597 hg19 chr7 54076318 54076318 p11.2 - Cell line Not given PCR and Sanger sequencing 25581428 2015 VISDB1.0
TVIS20004306 Human Papillomavirus HPV16 AY686584
 5572 - hg19 chr7 78188341 78188341 q21.11 MAGI2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20004307 Human Papillomavirus HPV16 AY686584
 4425 - hg19 chr7 78188939 78188939 q21.11 MAGI2 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS20005048 Human Papillomavirus HPV33 Not given 2999 - hg19 chr7 96662488 96662488 q21.3 SEM1 Tumor Head and Neck squamous cell carcinoma Whole genome, RNA, Whole-Exome sequencing and PCR 25313082 2014 VISDB1.0
TVIS30000906 Human Immunodeficiency Virus - Not given - - hg19 chr7 33350737 33350737 p14.3 BBS9 PBMC HIV infection/AIDS QiaQuick PCR and Sequencing 25011556 2014 VISDB1.0
TVIS30000937 Human Immunodeficiency Virus - Not given - - hg19 chr7 105324339 105324339 q22.3 SRPK2 PBMC HIV infection/AIDS QiaQuick PCR and Sequencing 25011556 2014 VISDB1.0
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