Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004436 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 9 95184731 95184731 q22.3 FANCC Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS10014884 Hepatitis B virus - NC_003977.1
 1931 2190 GRCh37.p10 9 126972125 126972204 q33.3 RALGPS1 Cell line Hepatocellular carcinoma PCR and Sanger sequencing 24582836 2014 VISDB1.0
TVIS20005054 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 9 112822823 112856070 q32 SNX30 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005055 Human Papillomavirus HPV18 Not given - - hg19 9 92150553 92151433 q22.31 ENSG00000236717, ENSG00000305084, ENSG00000290644 Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005064 Human Papillomavirus HPV18 Not given - - hg19 9 95002269 95060825 q22.32 AOPEP Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005072 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 9 129489295 129503697 q34.11 ENSG00000286078, ENSG00000309757, LINC00963 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005096 Human Papillomavirus HPV18 Not given - - hg19 9 136648873 136668301 q34.3 ENSG00000305600, ENSG00000228401, EGFL7 Tumor Adenocarcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005101 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 9 95048802 95196638 q22.32 MIR6081, ENSG00000296343, MIR23B, MIR27B, MIR3074, MIR24-1, ENSG00000229065, ENSG00000223849, RNA5SP288, ENSG00000296603, AOPEP, FANCC Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20004603 Human Papillomavirus HPV16 NC_001526.2
 279 317 hg19 9 97945631 97945713 q22.33 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004604 Human Papillomavirus HPV16 NC_001526.2
 659 692 hg19 9 97891262 97891289 q22.33 - Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0