Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004551 Human Papillomavirus HPV16 NC_001526.2
 3105 3132 hg19 chr13 73513400 73513425 q22.1 LINC00393 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004552 Human Papillomavirus HPV16 NC_001526.2
 3384 3417 hg19 chr13 73214729 73214940 q22.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004553 Human Papillomavirus HPV16 NC_001526.2
 84 107 hg19 chr3 140761094 140761171 q23 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004554 Human Papillomavirus HPV16 NC_001526.2
 450 474 hg19 chr14 47515165 47515194 q21.3 MDGA2 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004555 Human Papillomavirus HPV16 NC_001526.2
 469 495 hg19 chr20 26276707 26276730 p11.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004556 Human Papillomavirus HPV16 NC_001526.2
 582 607 hg19 chr19 55310178 55310208 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004557 Human Papillomavirus HPV16 NC_001526.2
 685 719 hg19 chr7 54076318 54076346 p11.2 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004558 Human Papillomavirus HPV16 NC_001526.2
 950 975 hg19 chrX 145696778 145696806 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004559 Human Papillomavirus HPV16 NC_001526.2
 1242 1272 hg19 chr21 20582438 20582475 q21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004560 Human Papillomavirus HPV16 NC_001526.2
 1364 1392 hg19 chr2 27136130 27136178 p23.3 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0