Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004583 Human Papillomavirus HPV16 NC_001526.2
 6801 6827 hg19 chr2 22416193 22416220 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004584 Human Papillomavirus HPV16 NC_001526.2
 6876 6902 hg19 chr19 55307401 55307456 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004585 Human Papillomavirus HPV16 NC_001526.2
 7219 7256 hg19 chr14 24818974 24819002 q12 ENSG00000288100, STXBP6 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004586 Human Papillomavirus HPV16 NC_001526.2
 7259 7359 hg19 chr2 22416230 22416260 p24.1 LINC03116, LINC01830 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004587 Human Papillomavirus HPV16 NC_001526.2
 7876 7901 hg19 chr2 27137149 27137175 p23.3 PRR30 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004588 Human Papillomavirus HPV16 NC_001526.2
 3651 3682 hg19 chr17 19706298 19706324 p11.2 SLC47A2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004589 Human Papillomavirus HPV16 NC_001526.2
 3694 3722 hg19 chr17 19706330 19706358 p11.2 SLC47A2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004590 Human Papillomavirus HPV16 NC_001526.2
 1361 1400 hg19 chrX 97125864 97125895 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004592 Human Papillomavirus HPV16 NC_001526.2
 3073 3104 hg19 chrX 97114880 97114904 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
TVIS20004593 Human Papillomavirus HPV16 NC_001526.2
 3245 3274 hg19 chrX 97118445 97118471 q21.33 DIAPH2 Tumor Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0