Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20004426 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr5 70155501 70155501 q13 ENSG00000300022 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004427 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr15 39400086 39400086 q14 ENSG00000304936, ENSG00000304952, ENSG00000259345 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004428 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr14 102870185 102870185 q32.32 TRAF3 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004429 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr22 44950929 44950929 q13.31 PHF21B Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004430 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr12 111470742 111470742 q24.1 ATXN2 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004431 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr17 59869893 59869893 q23.1 TUBD1 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004432 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr9 95107515 95107515 q22.3 AOPEP, FANCC Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004433 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr18 63173254 63173254 q21.3 BCL2 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004434 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr1 629408 629408 p36.33 MTND1P23, ENSG00000293331, LINC00115 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0
TVIS20004435 Human Papillomavirus HPV16 NC_001526.1
 - - GRCh37.p5 chr10 93256075 93256075 q23.33 ENSG00000296225 Tumor Oropharyngeal squamous cell carcinoma Amplification of Papillomavirus Oncogene Transcripts (APOT) 24586376 2014 VISDB1.0