Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005277 Human Papillomavirus HPV56 X74483.1
 - - hg19 chr9 136481130 136481131 q34.3 SEC16A Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS20005278 Human Papillomavirus HPV56 X74483.1
 - - hg19 chr9 136502401 136502402 q34.3 NOTCH1 Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS20005279 Human Papillomavirus HPV45 EF202163.1
 - - hg19 chr9 115159350 115159531 q33.1 DELEC1 Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS20005280 Human Papillomavirus HPV16 U89348.1
 - - hg19 chr20 31712224 31712234 q11.21 BCL2L1-AS1, BCL2L1 Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS20005281 Human Papillomavirus HPV16 AF536179.1
 - - hg19 chr20 31726244 31726245 q11.21 - Tumor Bladder cancer/Urothelial carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS42001148 Epstein-Barr Virus - Not given - - hg19 chr1 64179284 64179285 p31.3 ENSG00000303693, ROR1 - B-cell lymphoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC
TVIS42001149 Epstein-Barr Virus - Not given - - hg19 chr4 166211441 166211532 q32.3 ENSG00000308604 - Gastric carcinoma Bioinformatic analysis of Whole genome and RNA sequencing data using VIcaller pipeline; PCR and Sanger sequencing validation 30872350 2019 ViMIC