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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020006 Human Papillomavirus HPV16 NC_001526.2
 1344 1345 hg19 chr3 87949424 87949425 p11.1 HTR1F Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020007 Human Papillomavirus HPV16 NC_001526.2
 7478 7479 hg19 chr3 87949546 87949547 p11.1 HTR1F Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020008 Human Papillomavirus HPV16 NC_001526.2
 906 907 hg19 chr3 182235460 182235461 q26.33 LINC01994 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020009 Human Papillomavirus HPV16 NC_001526.2
 2160 2161 hg19 chr3 182237998 182237999 q26.33 LINC01994 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020010 Human Papillomavirus HPV16 NC_001526.2
 2117 2118 hg19 chr3 182238046 182238047 q26.33 LINC01994 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020011 Human Papillomavirus HPV16 NC_001526.2
 1193 1194 hg19 chr1 209408427 209408428 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020012 Human Papillomavirus HPV16 NC_001526.2
 1733 1734 hg19 chr1 209432638 209432639 q32.2 MIR205HG Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020013 Human Papillomavirus HPV16 NC_001526.2
 3651 3652 hg19 chr1 209468947 209468948 q32.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020014 Human Papillomavirus HPV16 NC_001526.2
 5044 5045 hg19 chr11 38347901 38347902 p12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020015 Human Papillomavirus HPV16 NC_001526.2
 1720 1721 hg19 chr11 38361539 38361540 p12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated