Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020166 Human Papillomavirus HPV16 NC_001526.2
 850 851 hg19 9 129094483 129094484 q34.11 CRAT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020167 Human Papillomavirus HPV16 NC_001526.2
 1205 1206 hg19 9 129095652 129095653 q34.11 CRAT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020168 Human Papillomavirus HPV16 NC_001526.2
 6038 6039 hg19 9 129098702 129098703 q34.11 ENSG00000234055, CRAT Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020169 Human Papillomavirus HPV16 NC_001526.2
 4419 4420 hg19 21 41639174 41639175 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020170 Human Papillomavirus HPV16 NC_001526.2
 856 857 hg19 21 41643183 41643184 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020171 Human Papillomavirus HPV16 NC_001526.2
 877 878 hg19 21 41645438 41645439 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020172 Human Papillomavirus HPV16 NC_001526.2
 2217 2218 hg19 21 41647721 41647722 q22.3 ENSG00000296085 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020173 Human Papillomavirus HPV16 NC_001526.2
 1307 1308 hg19 21 41664635 41664636 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020174 Human Papillomavirus HPV16 NC_001526.2
 4969 4970 hg19 21 41666399 41666400 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020175 Human Papillomavirus HPV16 NC_001526.2
 3402 3403 hg19 21 41667372 41667373 q22.3 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated