Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20019576 Human Papillomavirus HPV16 NC_001526.2
 4609 4610 hg19 4 1807051 1807052 p16.3 FGFR3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019577 Human Papillomavirus HPV16 NC_001526.2
 4669 4670 hg19 4 1807075 1807076 p16.3 FGFR3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019578 Human Papillomavirus HPV16 NC_001526.2
 502 503 hg19 1 10119404 10119405 p36.22 UBE4B Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019579 Human Papillomavirus HPV16 NC_001526.2
 1913 1914 hg19 1 21804426 21804427 p36.12 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019580 Human Papillomavirus HPV16 NC_001526.2
 6547 6548 hg19 14 44009291 44009292 q21.2 LINC02307 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019581 Human Papillomavirus HPV16 NC_001526.2
 2663 2664 hg19 5 684384 684385 p15.33 TPPP Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019582 Human Papillomavirus HPV16 NC_001526.2
 4209 4210 hg19 5 684625 684626 p15.33 TPPP Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019583 Human Papillomavirus HPV16 NC_001526.2
 7473 7474 hg19 9 107591399 107591400 q31.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019584 Human Papillomavirus HPV16 NC_001526.2
 4344 4345 hg19 9 107592409 107592410 q31.2 - Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20019585 Human Papillomavirus HPV16 NC_001526.2
 1412 1413 hg19 12 2529754 2529755 p13.33 CACNA1C Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated