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VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020356 Human Papillomavirus HPV16 NC_001526.2
 3259 3260 hg19 chr8 128778242 128778243 q24.21 CCDC26 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020357 Human Papillomavirus HPV16 NC_001526.2
 2844 2845 hg19 chr3 181931679 181931680 q26.33 ENSG00000302744 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020358 Human Papillomavirus HPV16 NC_001526.2
 3220 3221 hg19 chr15 67145011 67145012 q22.33 SMAD3-AS1, SMAD3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020359 Human Papillomavirus HPV16 NC_001526.2
 4298 4299 hg19 chr15 67145047 67145048 q22.33 SMAD3-AS1, SMAD3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020360 Human Papillomavirus HPV16 NC_001526.2
 6437 6438 hg19 chr15 67154015 67154016 q22.33 SMAD3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020361 Human Papillomavirus HPV16 NC_001526.2
 1057 1077 hg19 chr15 67162067 67162087 q22.33 SMAD3 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020362 Human Papillomavirus HPV16 NC_001526.2
 2096 2097 hg19 chr6 5575307 5575308 p25.1 FARS2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020363 Human Papillomavirus HPV16 NC_001526.2
 6159 6160 hg19 chr6 5578943 5578944 p25.1 FARS2 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020364 Human Papillomavirus HPV16 NC_001526.2
 207 208 hg19 chr6 79110268 79110269 q14.1 ENSG00000286340 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated
TVIS20020365 Human Papillomavirus HPV16 NC_001526.2
 447 448 hg19 chr6 79110280 79110281 q14.1 ENSG00000286340 Tumor-derived tumor samples and cell lines Oropharyngeal squamous cell carcinoma Whole genome sequencing, followed by bioinformatic analysis using tools like Hydra, DELLY, and SplazerS 34903527 2022 Curated