Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020604 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 99429760 100441988 q22.2 Y_RNA, MIR599, MIR875, RN7SL350P, ENSG00000253539, ENSG00000253912, ENSG00000287952, SNORD77B, ENSG00000221753, ENSG00000301454, POLR2K, Y_RNA, UFM1P3, Y_RNA, MIR4471, ENSG00000235683, SPAG1, ENSG00000302563, ENSG00000253217, ENSG00000253666, COX6C, RGS22, FBXO43, RNF19A, ENSG00000253824, VPS13B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020605 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 99446483 100458711 q22.2 Y_RNA, MIR599, MIR875, RN7SL350P, ENSG00000253539, ENSG00000253912, ENSG00000287952, SNORD77B, ENSG00000221753, ENSG00000301454, POLR2K, Y_RNA, UFM1P3, Y_RNA, MIR4471, ENSG00000235683, SPAG1, ENSG00000302563, ENSG00000253217, ENSG00000253666, COX6C, RGS22, FBXO43, RNF19A, ENSG00000253824, VPS13B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020606 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 99451383 100463611 q22.2 Y_RNA, MIR599, MIR875, RN7SL350P, ENSG00000253539, ENSG00000253912, ENSG00000287952, SNORD77B, ENSG00000221753, ENSG00000301454, POLR2K, Y_RNA, UFM1P3, Y_RNA, MIR4471, ENSG00000235683, SPAG1, ENSG00000302563, ENSG00000253217, ENSG00000253666, COX6C, RGS22, FBXO43, RNF19A, ENSG00000253824, VPS13B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020607 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 99507765 100519993 q22.2,q22.3 Y_RNA, MIR599, MIR875, RN7SL350P, ENSG00000253539, ENSG00000253912, ENSG00000287952, SNORD77B, ENSG00000221753, ENSG00000301454, POLR2K, Y_RNA, UFM1P3, Y_RNA, MIR4471, ENSG00000297282, ENSG00000235683, SPAG1, ENSG00000302563, ENSG00000253217, ENSG00000253666, COX6C, RGS22, FBXO43, RNF19A, ENSG00000253824, ANKRD46, VPS13B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020608 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126849521 127861766 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020609 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126849522 127861767 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020610 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126849523 127861768 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020611 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126849524 127861769 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020612 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126888238 127900483 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, ENSG00000278324, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020613 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126890325 127902570 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, MIR1204, ENSG00000278324, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1, PVT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated