Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020704 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126757259 127769504 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, ENSG00000253573, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020705 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126776584 127788829 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, ENSG00000253573, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020706 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126781863 127794108 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, ENSG00000253573, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020707 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr8 126781880 127794125 q24.21 ENSG00000224722, ENSG00000309748, ENSG00000271509, MYC, ENSG00000308490, ENSG00000253573, PRNCR1, ENSG00000286266, CASC11, CASC19, ENSG00000287781, CASC8, POU5F1B, CCAT2, ENSG00000286010, PCAT1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020708 Human Papillomavirus HPV26 - - - hg19 chr9 104804010 107566291 q31.1,q31.2 ENSG00000306712, ENSG00000226334, RN7SKP191, ENSG00000289227, RALGAPA1P1, ENSG00000279609, TAL2, ENSG00000228366, SLC25A6P5, ENSG00000225002, ENSG00000302742, ENSG00000229297, MIR8081, ENSG00000237062, RN7SKP77, ENSG00000228143, ENSG00000309269, RNA5SP292, ENSG00000302724, ENSG00000302701, RPL7AP44, ENSG00000306039, ENSG00000223615, ENSG00000225531, ENSG00000226535, ENSG00000287233, HMGN2P32, RNU6-492P, KLF4, ENSG00000289987, ENSG00000308462, ENSG00000236005, PPIAP88, ENSG00000299043, FKTN-AS1, DEPDC1P2, ENSG00000310433, ENSG00000303675, ENSG00000303685, ENSG00000302772, ENSG00000226047, ENSG00000305014, RAD23B, ENSG00000299203, LINC01509, ENSG00000308445, ENSG00000300342, ENSG00000299632, CT70, ENSG00000286536, SLC44A1, FSD1L, FKTN, TMEM38B, LINC01505, ENSG00000299785, ENSG00000230782, ENSG00000304997, ENSG00000309014, ABCA1, ZNF462 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020709 Human Papillomavirus HPV26 - - - hg19 chr9 105380471 108142752 q31.1,q31.2 ENSG00000289227, RALGAPA1P1, ENSG00000279609, TAL2, ENSG00000228366, SLC25A6P5, ENSG00000225002, ENSG00000302742, ENSG00000229297, MIR8081, ENSG00000237062, RN7SKP77, ENSG00000228143, ENSG00000309269, RNA5SP292, ENSG00000302724, ENSG00000302701, RPL7AP44, ENSG00000306039, ENSG00000223615, ENSG00000225531, ENSG00000226535, ENSG00000287233, HMGN2P32, RNU6-492P, KLF4, ENSG00000289987, ENSG00000308462, ENSG00000236005, PPIAP88, RNU6-996P, ENSG00000304985, ENSG00000294077, ENSG00000301201, ENSG00000295650, RNU6-1064P, ENSG00000302194, RN7SL659P, RPL36AP6, ENSG00000233727, RNA5SP293, RPS15AP27, RPL31P43, ENSG00000303981, CHCHD4P2, FKTN-AS1, DEPDC1P2, ENSG00000310433, ENSG00000303675, ENSG00000303685, ENSG00000302772, ENSG00000226047, ENSG00000305014, RAD23B, ENSG00000299203, LINC01509, ENSG00000308445, ENSG00000300342, ENSG00000299632, ENSG00000301055, ENSG00000299606, ENSG00000303967, SLC44A1, FSD1L, FKTN, TMEM38B, LINC01505, ENSG00000299785, ENSG00000230782, ENSG00000304997, ENSG00000309014, ENSG00000301188, ZNF462, ENSG00000303954 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020710 Human Papillomavirus HPV26 - - - hg19 chr9 105399619 108161900 q31.1,q31.2 ENSG00000289227, RALGAPA1P1, ENSG00000279609, TAL2, ENSG00000228366, SLC25A6P5, ENSG00000225002, ENSG00000302742, ENSG00000229297, MIR8081, ENSG00000237062, RN7SKP77, ENSG00000228143, ENSG00000309269, RNA5SP292, ENSG00000302724, ENSG00000302701, RPL7AP44, ENSG00000306039, ENSG00000223615, ENSG00000225531, ENSG00000226535, ENSG00000287233, HMGN2P32, RNU6-492P, KLF4, ENSG00000289987, ENSG00000308462, ENSG00000236005, PPIAP88, RNU6-996P, ENSG00000304985, ENSG00000294077, ENSG00000301201, ENSG00000295650, RNU6-1064P, ENSG00000302194, RN7SL659P, RPL36AP6, ENSG00000233727, RNA5SP293, RPS15AP27, RPL31P43, ENSG00000303981, CHCHD4P2, FKTN-AS1, DEPDC1P2, ENSG00000310433, ENSG00000303675, ENSG00000303685, ENSG00000302772, ENSG00000226047, ENSG00000305014, RAD23B, ENSG00000299203, LINC01509, ENSG00000308445, ENSG00000300342, ENSG00000299632, ENSG00000301055, ENSG00000299606, ENSG00000303967, SLC44A1, FSD1L, FKTN, TMEM38B, LINC01505, ENSG00000299785, ENSG00000230782, ENSG00000304997, ENSG00000309014, ENSG00000301188, ZNF462, ENSG00000303954 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020711 Human Papillomavirus HPV33 - - - hg19 chr9 5436902 5436902 p24.1 PLGRKT Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020712 Human Papillomavirus HPV33 - - - hg19 chr3 49050336 49087769 p21.31 RN7SL182P, ENSG00000290315, QRICH1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020713 Human Papillomavirus HPV33 - - - hg19 chr3 49051038 49088471 p21.31 RN7SL182P, ENSG00000290315, QRICH1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated