Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20020554 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr12 53207087 53600871 q13.13 ENSG00000297487, ENSG00000300047, ENSG00000283536, MFSD5, ENSG00000305608, MYG1-AS1, MYG1, ENSG00000303057, PCBP2-OT1, ENSG00000273658, ENSG00000293778, ENSG00000270175, TARBP2, NPFF, ENSG00000257550, ITGB7, ESPL1, PFDN5, ENSG00000288663, AAAS, SP7, SP1, AMHR2, PRR13, ENSG00000257379, MAP3K12, ENSG00000275488, RARG, ATF7-NPFF, ATF7, ENSG00000285692, PCBP2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020555 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 72623298 74627159 q24.3,q25.1 RPL32P33, ENSG00000302842, ENSG00000263893, RN7SKP180, ENSG00000252274, ENSG00000264196, ATG12P1, POLR3KP2, ENSG00000277728, ENSG00000265010, ENSG00000264750, ENSG00000265935, ENSG00000297340, ENSG00000295965, ENSG00000265927, RPL38, ENSG00000264272, ENSG00000266106, ENSG00000309634, BTBD17, ENSG00000308765, GPR142, ENSG00000302723, ENSG00000303298, RNA5SP448, CD300C, ENSG00000236770, ENSG00000306032, ENSG00000264860, SSTR2, ENSG00000309941, COG1, VCF1, MTNAP1, CPSF4L, CDC42EP4, ENSG00000264985, ENSG00000297572, ENSG00000266765, ENSG00000295102, ENSG00000295064, ENSG00000295082, MGC16275, TTYH2, DNAI2, KIF19, ENSG00000295167, ENSG00000294024, CD300A, CD300LB, ENSG00000289070, CD300H, CD300LD-AS1, CD300E, ENSG00000309557, SLC39A11, LINC02092, LINC00469, ENSG00000285648, ENSG00000288006, LINC02074, CD300LD, LINC00511, SDK2, GPRC5C Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020556 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr17 72623384 74627245 q24.3,q25.1 RPL32P33, ENSG00000302842, ENSG00000263893, RN7SKP180, ENSG00000252274, ENSG00000264196, ATG12P1, POLR3KP2, ENSG00000277728, ENSG00000265010, ENSG00000264750, ENSG00000265935, ENSG00000297340, ENSG00000295965, ENSG00000265927, RPL38, ENSG00000264272, ENSG00000266106, ENSG00000309634, BTBD17, ENSG00000308765, GPR142, ENSG00000302723, ENSG00000303298, RNA5SP448, CD300C, ENSG00000236770, ENSG00000306032, ENSG00000264860, SSTR2, ENSG00000309941, COG1, VCF1, MTNAP1, CPSF4L, CDC42EP4, ENSG00000264985, ENSG00000297572, ENSG00000266765, ENSG00000295102, ENSG00000295064, ENSG00000295082, MGC16275, TTYH2, DNAI2, KIF19, ENSG00000295167, ENSG00000294024, CD300A, CD300LB, ENSG00000289070, CD300H, CD300LD-AS1, CD300E, ENSG00000309557, SLC39A11, LINC02092, LINC00469, ENSG00000285648, ENSG00000288006, LINC02074, CD300LD, LINC00511, SDK2, GPRC5C Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020557 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 91940019 92128045 p11.1 ACTR3BP2, ENSG00000235147, IGKV1OR2-2, CHEK2P3, ENSG00000294660 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020558 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 160466261 161322772 q24.2 ENSG00000302735, ENSG00000279844, RN7SL423P, ENSG00000232337, ENSG00000225813, TANK-AS1, PSMD14-DT, LINC01806, ENSG00000294225, ENSG00000307318, ENSG00000299704, TANK, PSMD14, RBMS1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020559 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr13 72784306 73358444 q21.33,q22.1 RNU6-79P, PSMD10P3, FABP5P1, RNU6-66P, RNU4-10P, RNY1P8, ENSG00000298494, ENSG00000301480, KLF5, PIBF1 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020560 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr2 72766945 72994074 p13.2 SPR, ENSG00000278060, EMX1, ENSG00000309317, SFXN5, EXOC6B Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020561 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr13 62622145 63196278 q21.31 ENSG00000295271, ENSG00000297468, ENSG00000295243, LINC00448, ENSG00000273550, LINC00376 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020562 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr14 48658457 49127660 q21.3 ENSG00000258381, ENSG00000297710, ENSG00000258868, ENSG00000303665 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated
TVIS20020563 Human Papillomavirus HPV16 NC_028125
 - - hg19 chr15 27635530 27880676 q12,q13.1 ENSG00000303792, ENSG00000287922, ENSG00000258853, ENSG00000294045, ENSG00000232394, OCA2 Tumor Head and Neck squamous cell carcinoma HPV double capture and next-generation sequencing 35398964 2022 Curated