Search Results
| No. | VISDB ID | Virus Name | Subtype | Virus Genome | Breakpoint 1 | Breakpoint 2 | Human Genome | Chr | Start | End | Loci | Target Gene | Sample Type | Disease | Method | PubMed ID | Year | Curated Way |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | TVIS20030584 | Human Papillomavirus | HPV16 |
NC_001526.2 |
-4380 | - | hg38 | chr11 | -13061311 | -13061311 | p15.3 | ENSG00000255558 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 2 | TVIS20030585 | Human Papillomavirus | HPV16 |
NC_001526.2 |
1649 | - | hg38 | chr11 | 13177667 | 13177667 | p15.3 | ENSG00000296717 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 3 | TVIS20030586 | Human Papillomavirus | HPV16 |
NC_001526.2 |
2161 | - | hg38 | chr19 | -55652107 | -55652107 | q13.42 | CCDC106 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 4 | TVIS20030587 | Human Papillomavirus | HPV16 |
NC_001526.2 |
-2254 | - | hg38 | chr19 | 55652050 | 55652050 | q13.42 | CCDC106 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 5 | TVIS20030588 | Human Papillomavirus | HPV16 |
NC_001526.2 |
-4607 | - | hg38 | chr10 | -41862012 | -41862012 | q11.21 | - | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 6 | TVIS20030589 | Human Papillomavirus | HPV16 |
NC_001526.2 |
3960 | - | hg38 | chr17 | 55503775 | 55503775 | q22 | SMIM36, ENSG00000304090 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 7 | TVIS20030590 | Human Papillomavirus | HPV16 |
NC_001526.2 |
4823 | - | hg38 | chr19 | 25855359 | 25855359 | p11 | - | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 8 | TVIS20030591 | Human Papillomavirus | HPV16 |
NC_001526.2 |
4170 | - | hg38 | chr2 | 31120179 | 31120179 | p23.1 | GALNT14 | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 9 | TVIS20030592 | Human Papillomavirus | HPV16 |
NC_001526.2 |
-4230 | - | hg38 | chr7 | -82890960 | -82890960 | q21.11 | PCLO | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
| 10 | TVIS20030593 | Human Papillomavirus | HPV16 |
NC_001526.2 |
-2169 | - | hg38 | chr7 | -5048955 | -5048955 | p22.1 | RBAK-RBAKDN, RBAK | Tumor | Squamous cell carcinoma | DNA extraction and HPV hybridization capture sequencing | 37244055 | 2023 | Curated |
