Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS10062384 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3166 - hg38 chr12 120995394 120995394 q24.31 HNF1A Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062385 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3165 - hg38 chr11 5946294 5946294 p15.4 OR56A3 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062386 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chr12 120995632 120995632 q24.31 HNF1A Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062387 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3166 - hg38 chr12 120995816 120995816 q24.31 HNF1A Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062388 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chr12 120994967 120994967 q24.31 HNF1A Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062389 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3168 - hg38 chr12 120995765 120995765 q24.31 HNF1A Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062390 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 3180 - hg38 chr7 7705852 7705852 p21.3 RPA3, ENSG00000308992, UMAD1, ENSG00000283549 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062391 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 503 - hg38 chr1 630538 630538 p36.33 MTND2P28, ENSG00000293331, LINC00115 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062392 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 1242 - hg38 chr6 12017287 12017287 p24.1 ENSG00000310274, HIVEP1 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated
TVIS10062393 Hepatitis B virus Genotype D EU054331, X02763, GQ477489, AB219428, D00331, GQ924620, GQ358158, AB246345, and U95551
 496 - hg38 chr15 50125750 50125750 q21.2 ATP8B4 Cell line Hepatocellular carcinoma Rapid Amplification of Integration Site without Interference by Genomic DNA contamination (RAISING) method and next-generation sequencing 38051537 2023 Curated