Search Results


VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chromosome Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way ▼
TVIS20005069 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 3 171068853 171079657 q26.2 TNIK, ENSG00000286856 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005070 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 3 171079874 171080219 q26.2 TNIK, ENSG00000286856 Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005071 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 13 88266533 88280722 q31.2 - Tumor Squamous-cell carcinoma Whole-genome sequencing 24390348 2014 VISDB1.0
TVIS20005072 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 9 129489295 129503697 q34.11 ENSG00000286078, ENSG00000309757, LINC00963 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005073 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 17 40309286 40331029 q21.2 RARA, ENSG00000287644 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005074 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 16 14619598 14678790 p13.12 ENSG00000305482, RNU7-125P, BFAR, PARN, PLA2G10 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005075 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 17 39657057 39765094 q12 PNMT, ENSG00000305964, MIR4728, MIEN1, GRB7, ENSG00000294270, STARD3, TCAP, PGAP3, ERBB2, IKZF3 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005076 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 17 81847347 81863247 q25.3 ENSG00000293751, ENSG00000278876, P4HB Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005077 Human Papillomavirus HPV31 Not given - - hg19 22 46109303 46125439 q13.31 MIRLET7A3, MIR4763, MIRLET7B, MIRLET7BHG Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0
TVIS20005078 Human Papillomavirus HPV16 HQ644271.1
 - - hg19 13 71839096 71888688 q21.33 RPL35AP31, ENSG00000293895, DACH1 Tumor Squamous-cell carcinoma RNA-Seq+RT-PCR 24390348 2014 VISDB1.0