Search Results


No. VISDB ID Virus Name Subtype Virus Genome Breakpoint 1 Breakpoint 2 Human Genome Chr Start End Loci Target Gene Sample Type Disease Method PubMed ID Year Curated Way
69591 TVIS20004553 Human Papillomavirus HPV16 NC_001526.2
84 107 hg19 chr3 140761094 140761171 q23 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69592 TVIS20004554 Human Papillomavirus HPV16 NC_001526.2
450 474 hg19 chr14 47515165 47515194 q21.3 MDGA2 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69593 TVIS20004555 Human Papillomavirus HPV16 NC_001526.2
469 495 hg19 chr20 26276707 26276730 p11.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69594 TVIS20004556 Human Papillomavirus HPV16 NC_001526.2
582 607 hg19 chr19 55310178 55310208 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69595 TVIS20004557 Human Papillomavirus HPV16 NC_001526.2
685 719 hg19 chr7 54076318 54076346 p11.2 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69596 TVIS20004558 Human Papillomavirus HPV16 NC_001526.2
950 975 hg19 chrX 145696778 145696806 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69597 TVIS20004559 Human Papillomavirus HPV16 NC_001526.2
1242 1272 hg19 chr21 20582438 20582475 q21.1 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69598 TVIS20004560 Human Papillomavirus HPV16 NC_001526.2
1364 1392 hg19 chr2 27136130 27136178 p23.3 - Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69599 TVIS20004561 Human Papillomavirus HPV16 NC_001526.2
1430 1455 hg19 chrX 145693638 145693668 q27.3 ENSG00000286085 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0
69600 TVIS20004562 Human Papillomavirus HPV16 NC_001526.2
1817 1838 hg19 chr19 55293045 55293072 q13.42 BRSK1 Cell line Cervical cancer FISH, WGS, RNA-seq, qPCR 24201445 distinct from chromothripsis and other mutational processes VISDB1.0