| GSE71315 | Single cell analysis of long non-coding RNAs in the developing human neocortex | 27081004 | 2016 | Cerebral Cortex GW19.5[26] Cerebral Cortex GW20.5[123] Cerebral Cortex GW23.5[77]
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| GSE44618 | Single Cell RNA-Seq | 24299736 | 2013 | GM12878[28]
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| GSE72056 | Single cell RNA-seq analysis of melanoma | 27124452 | 2016 | B-cell[326] CAF[39] Endothelial cell[40] Macrophage[42] melanoma[1071] melanoma tumor[246] T-cell[1302] unresolved[96]
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| GSE64016 | Single cell RNA-seq data of human hESCs to evaluate Oscope - a statistical pipeline for identifying oscillatory genes in unsynchronized single cell RNA-Seq | 26301841 | 2015 | single H1 hESC[213] single H1-Fucci cell sorted from G1 phase of the cell cycle only[91] single H1-Fucci cell sorted from G2-M phase of the cell cycle only[76] single H1-Fucci cell sorted from S phase of the cell cycle only[80]
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| GSE57872 | Single cell RNA-seq of primary human glioblastomas | 24925914 | 2014 | glioblastoma [Cla][45] glioblastoma [Cla+Mes][6] glioblastoma [Mes][101] glioblastoma [Neu][24] glioblastoma [Neu+Cla][2] glioblastoma [Neu+Mes][19] glioblastoma [None][120] glioblastoma [Pro][88] glioblastoma [Pro+Cla][20] glioblastoma [Pro+Neu][5]
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| GSE70580 | Single cell RNA-sequencing of human tonsil Innate lymphoid cells (ILCs) | 26878113 | 2016 | Donor T74-tonsil innate lymphoid cell (ILC1)[1] Donor T74-tonsil innate lymphoid cell (ILC2)[11] Donor T74-tonsil innate lymphoid cell (ILC3)[38] Donor T74-tonsil innate lymphoid cell (NK)[25] Donor T75-tonsil innate lymphoid cell (ILC1)[60] Donor T75-tonsil innate lymphoid cell (ILC2)[62] Donor T75-tonsil innate lymphoid cell (ILC3)[128] Donor T75-tonsil innate lymphoid cell (NK)[23] Donor T86-tonsil innate lymphoid cell (ILC1)[66] Donor T86-tonsil innate lymphoid cell (ILC2)[66] Donor T86-tonsil innate lymphoid cell (ILC3)[142] Donor T86-tonsil innate lymphoid cell (NK)[26]
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| GSE69790 | Single cell transcriptomics analysis of induced pluripotent stem cell-derived cortical neurons reveals frequent dual layer identity | 26740550 | 2016 | iPSC-derived cortical neuron[16]
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| GSE65364 | Single Cell triple omics sequencing reveals genetic and epigenetic heterogeneity in hepatocellular carcinoma | 26902283 | 2016 | HepG2 cell line[8] liver cancer cell[26]
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| GSE66053 | Single mammalian cells compensate for differences in cellular volume and DNA copy number through independent global transcriptional mechanisms | 25866248 | 2015 | primary foreskin fibroblast cell CRL2097 (fixed cell)[14] primary foreskin fibroblast cell CRL2097 (large live)[74] primary foreskin fibroblast cell CRL2097 (med live)[3]
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| GSE69405 | Single-cell RNA sequencing of lung adenocarcinoma patient-derived cells | 26084335 | 2015 | human lung cancer cell line (H358)[50] PDX, LC-MBT-15[49] PDX, LC-PT-45[34] PDX, LC-PT-45-Re[43]
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