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  melanoma

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in melanoma

Displaying 141-150 of 1071 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1851218Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PD1-pos-AS-C3-R1-B08-S308-combmelanoma
GSE72056GSM1851219Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-B12-S24-combmelanoma
GSE72056GSM1851220Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-B02-S14-combmelanoma
GSE72056GSM1851223Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-C08-S32-combmelanoma
GSE72056GSM1851224Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-F06-S66-combmelanoma
GSE72056GSM1851226Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-E01-S49-combmelanoma
GSE72056GSM1851227Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-F01-S157-combmelanoma
GSE72056GSM1851228Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-D09-S45-combmelanoma
GSE72056GSM1851232Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-H01-S181-combmelanoma
GSE72056GSM1851233Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-A04-S4-combmelanoma

Gene rank in melanoma

Displaying 1-10 of 22503 results.
Rank orderGene SymbolEnsembl ID
1MTRNR2L2ENSG00000271043
2MTRNR2L8ENSG00000255823
3MTRNR2L1ENSG00000256618
4GAPDHENSG00000111640
5RPS18ENSG00000096150
6RPLP1ENSG00000137818
7RPL41ENSG00000229117
8FTH1ENSG00000167996
9VIMENSG00000026025
10RPL3ENSG00000100316