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  melanoma

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in melanoma

Displaying 161-170 of 1071 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1851255Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-F11-S167-combmelanoma
GSE72056GSM1851257Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PD1-pos-AS-C3-R1-C04-S316-combmelanoma
GSE72056GSM1851258Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-F06-S162-combmelanoma
GSE72056GSM1851263Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-A12-S108-combmelanoma
GSE72056GSM1851264Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PD1-pos-AS-C3-R1-B04-S304-combmelanoma
GSE72056GSM1851265Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-F04-S160-combmelanoma
GSE72056GSM1851266Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-C08-S128-combmelanoma
GSE72056GSM1851268Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-F03-S63-combmelanoma
GSE72056GSM1851269Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-H07-S187-combmelanoma
GSE72056GSM1851270Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-B07-S115-combmelanoma

Gene rank in melanoma

Displaying 1-10 of 22503 results.
Rank orderGene SymbolEnsembl ID
1MTRNR2L2ENSG00000271043
2MTRNR2L8ENSG00000255823
3MTRNR2L1ENSG00000256618
4GAPDHENSG00000111640
5RPS18ENSG00000096150
6RPLP1ENSG00000137818
7RPL41ENSG00000229117
8FTH1ENSG00000167996
9VIMENSG00000026025
10RPL3ENSG00000100316