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  melanoma

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in melanoma

Displaying 171-180 of 1071 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1851271Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-G04-S172-combmelanoma
GSE72056GSM1851273Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-G07-S79-combmelanoma
GSE72056GSM1851274Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-G12-S180-combmelanoma
GSE72056GSM1851275Illumina NextSeq 500Homo sapienscy79-p3-CD45-neg-PD1-pos-AS-C3-R1-B10-S310-combmelanoma
GSE72056GSM1851279Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-G03-S75-combmelanoma
GSE72056GSM1851282Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-G09-S81-combmelanoma
GSE72056GSM1851285Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-B04-S112-combmelanoma
GSE72056GSM1851286Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-C10-S34-combmelanoma
GSE72056GSM1851290Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-pos-AS-C1-R1-E11-S59-combmelanoma
GSE72056GSM1851291Illumina NextSeq 500Homo sapienscy79-p1-CD45-neg-PDL1-neg-AS-C4-R1-C07-S127-combmelanoma

Gene rank in melanoma

Displaying 71-80 of 22503 results.
Rank orderGene SymbolEnsembl ID
71RPL12ENSG00000197958
72RPS3ENSG00000149273
73RPL13AP5ENSG00000236552
74PSAPENSG00000197746
75RPS15AENSG00000134419
76HLA-AENSG00000206503
77EIF1ENSG00000173812
78UBBENSG00000170315
79HLA-BENSG00000206450
80RPS16ENSG00000105193