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  hiPSC

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in hiPSC

Displaying 11-11 of 11 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643169AB 5500xl Genetic AnalyzerHomo sapiensiPSC_ko2hiPSC

Gene rank in hiPSC

Displaying 20721-20730 of 20748 results.
Rank orderGene SymbolEnsembl ID
20721RIPPLY1ENSG00000147223
20722CLDN2ENSG00000165376
20723CXorf41
20724LOC100329135
20725IL13RA2ENSG00000123496
20726CT47B1ENSG00000236446
20727LOC100507170
20728CT47A11ENSG00000226929
20729CT47A10ENSG00000224089
20730CT47A8ENSG00000230347