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  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 31-39 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1852808Illumina NextSeq 500Homo sapiensCy59_55CAF
GSE72056GSM1852805Illumina NextSeq 500Homo sapiensCy59_52CAF
GSE72056GSM1852790Illumina NextSeq 500Homo sapiensCy59_2CAF
GSE72056GSM1852780Illumina NextSeq 500Homo sapiensCy59_18CAF
GSE72056GSM1852778Illumina NextSeq 500Homo sapiensCy59_16CAF
GSE72056GSM1852420Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-F09-S357-combCAF
GSE72056GSM1852350Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-D07-S331-combCAF
GSE72056GSM1852253Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-C01-S313-combCAF
GSE72056GSM1852453Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-B04-S304-combCAF

Gene rank in CAF

Displaying 161-170 of 22503 results.
Rank orderGene SymbolEnsembl ID
161HLA-BENSG00000206450
162FAUENSG00000149806
163IFITM2ENSG00000185201
164CLIC1ENSG00000206394
165DDX5ENSG00000108654
166DSTNENSG00000125868
167HLA-CENSG00000204525
168HNRNPA1ENSG00000135486
169OST4ENSG00000228474
170MMP2ENSG00000087245