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Cell Information

  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 31-39 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1852350Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-D07-S331-combCAF
GSE72056GSM1852253Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-C01-S313-combCAF
GSE72056GSM1852219Illumina NextSeq 500Homo sapienscy82-CD45-neg-1-B09-S213-combCAF
GSE72056GSM1852053Illumina NextSeq 500Homo sapienscy82-CD45-neg-2-E02-S242-combCAF
GSE72056GSM1851831Illumina NextSeq 500Homo sapienscy82-CD45-pos-1-D06-S522-combCAF
GSE72056GSM1851792Illumina NextSeq 500Homo sapienscy82-CD45-pos-1-C12-S516-combCAF
GSE72056GSM1851641Illumina NextSeq 500Homo sapienscy80-CD45-neg-D12-S912-combCAF
GSE72056GSM1850989Illumina NextSeq 500Homo sapiensCy80_II_CD45_H03_S951_combCAF
GSE72056GSM1850587Illumina NextSeq 500Homo sapiensCy80_II_CD45_G05_S941_combCAF

Gene rank in CAF

Displaying 22311-22320 of 22503 results.
Rank orderGene SymbolEnsembl ID
22311LINC00251ENSG00000280725
22312ATP6V0A4ENSG00000105929
22313RBKSENSG00000171174
22314IFNL2ENSG00000183709
22315TPSAB1ENSG00000172236
22316MFSD6LENSG00000185156
22317LOC100129216ENSG00000225805
22318SORCS1ENSG00000108018
22319LOC100128946
22320TREX2ENSG00000183479