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Cell Information

  CAF

Overall DesignTumors were disaggregated, sorted into single cells, and profiled by Smart-seq2.
SummaryTo understand the diversity of expression states within melanoma tumors, we obtained freshly resected samples, dissagregated the samples, sorted into single cells and profiled them by single-cell RNA-seq.
Dataset viewGSE72056
PMID27124452

Samples in CAF

Displaying 31-39 of 39 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE72056GSM1852508Illumina NextSeq 500Homo sapienscy82-CD45-neg-3-C08-S800-combCAF
GSE72056GSM1853020Illumina NextSeq 500Homo sapiensCY80-neg-G06-S78-combCAF
GSE72056GSM1852253Illumina NextSeq 500Homo sapienscy53-1-CD45-neg-C01-S313-combCAF
GSE72056GSM1853535Illumina NextSeq 500Homo sapienscy80_CD_90_pos_B06_S882_combCAF
GSE72056GSM1852778Illumina NextSeq 500Homo sapiensCy59_16CAF
GSE72056GSM1852780Illumina NextSeq 500Homo sapiensCy59_18CAF
GSE72056GSM1850989Illumina NextSeq 500Homo sapiensCy80_II_CD45_H03_S951_combCAF
GSE72056GSM1853564Illumina NextSeq 500Homo sapienscy80_CD_90_pos_E05_S917_combCAF
GSE72056GSM1852790Illumina NextSeq 500Homo sapiensCy59_2CAF

Gene rank in CAF

Displaying 191-200 of 22503 results.
Rank orderGene SymbolEnsembl ID
191THBS1ENSG00000137801
192SERPINF1ENSG00000132386
193COX4I1ENSG00000131143
194PKMENSG00000067225
195RANENSG00000132341
196RPL13ENSG00000167526
197HSP90B1ENSG00000166598
198TPM1ENSG00000140416
199CALD1ENSG00000122786
200CD248ENSG00000174807