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  human preimplantation blastomere [early blastomere]

Overall DesignWe get transcriptome of 124 individual cells from human pre-implantation embryos and human embryonic stem cells by applying single cell RNA-seq technique we recently developed[1][2][3][4]. We did in-depth bioinformatic analysis to these data and found very dynamic expression of protein-coding genes.
SummaryFind the casual relationship between gene expression network and cellular phenotype at single cell resolution. We collected donated human pre-implatation embryos, and the embryonic stem cells derived from them, isolate individual cells, prepared single cell cDNAs, and sequenced them by HiSeq2000. Then we analyzed the expression of known RefSeq genes.
Dataset viewGSE36552
PMID23934149

Samples in human preimplantation blastomere [early blastomere]

Displaying 41-50 of 78 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE36552GSM922186Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#1human preimplantation blastomere [early blastomere]
GSE36552GSM922187Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#2human preimplantation blastomere [early blastomere]
GSE36552GSM922188Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#3human preimplantation blastomere [early blastomere]
GSE36552GSM922189Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#4human preimplantation blastomere [early blastomere]
GSE36552GSM922190Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#5human preimplantation blastomere [early blastomere]
GSE36552GSM922191Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#6human preimplantation blastomere [early blastomere]
GSE36552GSM922192Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#7human preimplantation blastomere [early blastomere]
GSE36552GSM922193Illumina HiSeq 2000Homo sapiensMorulae #2 -Cell#8human preimplantation blastomere [early blastomere]
GSE36552GSM922194Illumina HiSeq 2000Homo sapiensLate blastocyst #1 -Cell#1human preimplantation blastomere [early blastomere]
GSE36552GSM922195Illumina HiSeq 2000Homo sapiensLate blastocyst #1 -Cell#2human preimplantation blastomere [early blastomere]

Gene rank in human preimplantation blastomere [early blastomere]

Displaying 151-160 of 20278 results.
Rank orderGene SymbolEnsembl ID
151PFN1ENSG00000108518
152EIF3KENSG00000178982
153COX4I1ENSG00000131143
154HMGB1ENSG00000189403
155SRP14ENSG00000140319
156NME2ENSG00000243678
157RPL38ENSG00000172809
158MRFAP1ENSG00000179010
159ATF4ENSG00000128272
160MAPRE1ENSG00000101367