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  d2 AG+ cells

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in d2 AG+ cells

Displaying 1-2 of 2 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643170AB 5500xl Genetic AnalyzerHomo sapiensd2_wt1d2 AG+ cells
GSE67259GSM1643171AB 5500xl Genetic AnalyzerHomo sapiensd2_wt2d2 AG+ cells

Gene rank in d2 AG+ cells

Displaying 20641-20650 of 20748 results.
Rank orderGene SymbolEnsembl ID
20641MIR98ENSG00000271886
20642PFKFB1ENSG00000158571
20643PAGE2ENSG00000234068
20644VSIG4ENSG00000155659
20645DGAT2L6ENSG00000184210
20646AWAT1ENSG00000204195
20647ARR3ENSG00000120500
20648RAB41ENSG00000147127
20649TEX11ENSG00000120498
20650CXorf65ENSG00000204165