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  iMeLC

Overall DesignRNAseq analysis of human induced pluripotent stem cells (hiPSC), incipient mesoderm-like cells (iMeLC) and primordial germ cell-like cells (BLIMP1-2A-tdTomato (BT)/TFAP2C-2A-ECFP (AG) expressing cells or EpCAM/CD49f (CSM) positive cells)
SummaryMechanisms underlying human germ cell development are unclear, partly due to difficulties in studying human embryos and lack of suitable experimental systems. Here, we show that human induced pluripotent stem cells (hiPSCs) differentiate into incipient mesoderm-like cells (iMeLCs), which robustly generate human primordial germ cell-like cells (hPGCLCs) that can be purified using the surface markers EpCAM and INTEGRINα6. The transcriptomes of hPGCLCs and primordial germ cells (PGCs) isolated from non-human primates are similar, and although specification of hPGCLCs and mouse PGCs rely on similar signaling pathways, hPGCLC specification transcriptionally activates germline fate without transiently inducing eminent somatic programs. This includes genes important for naive pluripotency and repression of key epigenetic modifiers, concomitant with epigenetic reprogramming. Accordingly, BLIMP1, which represses somatic programs in mice, activates and stabilizes a germline transcriptional circuit and represses a default neuronal differentiation program. Together, these findings provide a foundation for understanding and reconstituting human germ cell development in vitro.
Dataset viewGSE67259
PMID26189426

Samples in iMeLC

Displaying 1-4 of 4 results.
SeriesSampleInstrumentOrganismTitleCell Source
GSE67259GSM1643145AB 5500xl Genetic AnalyzerHomo sapiensiMeLC#1iMeLC
GSE67259GSM1643146AB 5500xl Genetic AnalyzerHomo sapiensiMeLC#2iMeLC
GSE67259GSM1643161AB 5500xl Genetic AnalyzerHomo sapiens585A1_iMeLC#1iMeLC
GSE67259GSM1643162AB 5500xl Genetic AnalyzerHomo sapiens585A1_iMeLC#2iMeLC

Gene rank in iMeLC

Displaying 1-10 of 20748 results.
Rank orderGene SymbolEnsembl ID
1EEF1A1ENSG00000156508
2LOC100505829
3RPS27AENSG00000143947
4RPLP0ENSG00000089157
5RPS24ENSG00000138326
6RPS12ENSG00000112306
7RPS20ENSG00000008988
8RPS3AENSG00000145425
9GAPDHENSG00000111640
10RPS23ENSG00000186468