gene,0,0 GSM1643170,0,22.039 GSM1643171,0,21.44 GSM1643147,0,9.891 GSM1643148,0,3.02 GSM1643172,0,13.586 GSM1643173,0,319.214 GSM1643174,0,191.109 GSM1643175,0,2.841 GSM1643176,0,1.49 GSM1643149,0,1.892 GSM1643150,0,1.513 GSM1643177,0,2.626 GSM1643178,0,55.526 GSM1643179,0,68.863 GSM1643151,0,2.308 GSM1643152,0,2.978 GSM1643157,0,0.983 GSM1643158,0,1.218 GSM1643163,0,4.518 GSM1643164,0,4.828 GSM1643153,0,0.462 GSM1643154,0,4.682 GSM1643143,0,397.073 GSM1643144,0,440.555 GSM1643155,0,432.909 GSM1643156,0,358.058 GSM1643159,0,334.619 GSM1643160,0,368.39 GSM1643165,0,455.841 GSM1643166,0,374.345 GSM1643167,0,383.607 GSM1643168,0,418.199 GSM1643169,0,373.907 GSM1643145,0,458.932 GSM1643146,0,461.891 GSM1643161,0,512.426 GSM1643162,0,522.952
| Synonyms | BCATC;BCT1;ECA39;MECA39;PNAS121;PP18 |
| Description | branched chain amino acid transaminase 1 |
|---|---|
| Chromosome | 12p12.1 |
| Database Reference | MIM:113520 HGNC:976 HPRD:00216 Vega:OTTHUMG00000169053 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| BCAT1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 21.44 | 21.74 | 22.039 |
| d2 BTAG+ cells | 3.02 | 13.586 | 319.214 |
| d4 AG+ cells | 1.49 | 2.166 | 2.841 |
| d4 BTAG+ cells | 1.513 | 2.626 | 68.863 |
| d6 BTAG+ cells | 0.983 | 1.763 | 2.978 |
| d6 CSM+ cells | 4.518 | 4.673 | 4.828 |
| d8 BTAG+ cells | 0.462 | 2.572 | 4.682 |
| hiPSC | 334.619 | 383.607 | 455.841 |
| iMeLC | 458.932 | 487.159 | 522.952 |
| Comparing BCAT1 expression between groups | FDR |
|---|---|
| d4 AG+ cells VS iMeLC | 0.00426964731478532 |
| d4 BTAG+ cells VS d6 BTAG+ cells | NS |
| d4 BTAG+ cells VS d6 CSM+ cells | NS |
| d4 BTAG+ cells VS d8 BTAG+ cells | NS |
| d4 BTAG+ cells VS hiPSC | 3.37426843575169e-05 |
| d4 BTAG+ cells VS iMeLC | 0.01769581995832 |
| d6 BTAG+ cells VS d6 CSM+ cells | NS |
| d6 BTAG+ cells VS d8 BTAG+ cells | NS |
| d6 BTAG+ cells VS hiPSC | 1.39078889364278e-05 |
| d6 BTAG+ cells VS iMeLC | 0.00101488035449431 |
| d6 CSM+ cells VS d8 BTAG+ cells | NS |
| d6 CSM+ cells VS hiPSC | 9.77568541934714e-08 |
| d6 CSM+ cells VS iMeLC | 0.00401942931336632 |
| d8 BTAG+ cells VS hiPSC | 1.33554798952049e-07 |
| d8 BTAG+ cells VS iMeLC | 0.0108667882738382 |
| hiPSC VS iMeLC | 0.0135783220186145 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
