gene,0,0 GSM967508,0,0 GSM967509,0,70.587 GSM967510,0,2.812 GSM967511,0,15.093 GSM967512,0,1.061 GSM967513,0,59.616 GSM967514,0,52.885 GSM967515,0,0 GSM967516,0,605.096 GSM967517,0,3218.893 GSM967518,0,624.533 GSM967519,0,3414.221 GSM967520,0,954.012 GSM967521,0,2182.798 GSM967535,0,0 GSM967536,0,55.121 GSM967537,0,29.934 GSM967538,0,52.377 GSM967539,0,47.744 GSM967540,0,73.111 GSM967541,0,150.757 GSM967542,0,870.315 GSM967543,0,309.827 GSM967544,0,713.894 GSM967545,0,102.471 GSM967546,0,5.916 GSM967547,0,85.579 GSM967548,0,29.573 GSM967549,0,77.072 GSM967550,0,49.85 GSM967551,0,108.985 GSM967552,0,124.793 GSM967553,0,126.758 GSM967554,0,271.879 GSM967555,0,0 GSM967556,0,26.025 GSM967557,0,0
| Synonyms | NIP3 |
| Description | BCL2 interacting protein 3 |
|---|---|
| Chromosome | 10q26.3 |
| Database Reference | MIM:603293 HGNC:1084 HPRD:04482 Vega:OTTHUMG00000019278 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| BNIP3 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 8.952 | 70.587 |
| LNCaP cell | 605.096 | 1,568.405 | 3,414.221 |
| NG2-sorted cell from blood | 0 | 50.06 | 73.111 |
| PC3 cell | 150.757 | 511.86 | 870.315 |
| Primary melanocyte | 5.916 | 54.193 | 102.471 |
| SKMEL5 cell | 29.573 | 63.461 | 85.579 |
| T24 cell | 108.985 | 125.776 | 271.879 |
| UACC257 cell | 0 | 0 | 26.025 |
| Comparing BNIP3 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | 0.000389059632905451 |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.0225470731148119 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | 0.000268167090328924 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.00221826030800551 |
| LNCaP cell VS T24 cell | 0.0121277613181955 |
| LNCaP cell VS UACC257 cell | 0.0179424722118296 |
| NG2-sorted cell from blood VS PC3 cell | 0.0121400378133287 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
