gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0 GSM967512,0,0 GSM967513,0,0 GSM967514,0,0 GSM967515,0,0.092 GSM967516,0,17.222 GSM967517,0,0.059 GSM967518,0,4.853 GSM967519,0,0.079 GSM967520,0,0 GSM967521,0,0.095 GSM967535,0,905.51 GSM967536,0,4462.738 GSM967537,0,1511.384 GSM967538,0,2074.83 GSM967539,0,2694.484 GSM967540,0,2062.938 GSM967541,0,0 GSM967542,0,0.077 GSM967543,0,0 GSM967544,0,0.358 GSM967545,0,433.189 GSM967546,0,183.516 GSM967547,0,526.288 GSM967548,0,1199.35 GSM967549,0,1816.069 GSM967550,0,752.912 GSM967551,0,0 GSM967552,0,0.072 GSM967553,0,0.031 GSM967554,0,0 GSM967555,0,1024.405 GSM967556,0,1856.813 GSM967557,0,1190.54
| Synonyms | CANP3;CANPL3;LGMD2;LGMD2A;nCL-1;p94 |
| Description | calpain 3 |
|---|---|
| Chromosome | 15q15.1 |
| Database Reference | MIM:114240 HGNC:1480 HPRD:00255 Vega:OTTHUMG00000130619 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| CAPN3 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0 | 0.092 |
| LNCaP cell | 0 | 0.087 | 17.222 |
| NG2-sorted cell from blood | 905.51 | 2,068.884 | 4,462.738 |
| PC3 cell | 0 | 0.039 | 0.358 |
| Primary melanocyte | 183.516 | 308.353 | 433.189 |
| SKMEL5 cell | 526.288 | 976.131 | 1,816.069 |
| T24 cell | 0 | 0.015 | 0.072 |
| UACC257 cell | 1,024.405 | 1,190.54 | 1,856.813 |
| Comparing CAPN3 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.000499259085145429 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | 0.00891926902458096 |
| Embryonic stem cell VS SKMEL5 cell | 0.0011340985743628 |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | 0.000874805535634105 |
| LNCaP cell VS NG2-sorted cell from blood | 0.000882333889646371 |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0122830074803137 |
| LNCaP cell VS T24 cell | 0.0371371693193073 |
| LNCaP cell VS UACC257 cell | 0.0415457862353985 |
| NG2-sorted cell from blood VS PC3 cell | 0.00634915631763754 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | 0.0474604649259868 |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | 0.0057101005288545 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
