gene,0,0 GSM967508,0,0.03 GSM967509,0,0 GSM967510,0,0.096 GSM967511,0,0.035 GSM967512,0,4.686 GSM967513,0,3.072 GSM967514,0,0 GSM967515,0,0.341 GSM967516,0,0.159 GSM967517,0,0.129 GSM967518,0,0.098 GSM967519,0,0.02 GSM967520,0,0.174 GSM967521,0,0.092 GSM967535,0,116.757 GSM967536,0,127.369 GSM967537,0,174.316 GSM967538,0,252.398 GSM967539,0,40.922 GSM967540,0,426.151 GSM967541,0,109.808 GSM967542,0,207.333 GSM967543,0,179.323 GSM967544,0,142.956 GSM967545,0,214.766 GSM967546,0,855.834 GSM967547,0,181.387 GSM967548,0,327.049 GSM967549,0,252.804 GSM967550,0,151.639 GSM967551,0,698.754 GSM967552,0,688.475 GSM967553,0,893.431 GSM967554,0,693.048 GSM967555,0,283.307 GSM967556,0,233.669 GSM967557,0,209.346
| Synonyms | CDW44;CSPG8;ECMR-III;HCELL;HUTCH-I;IN;LHR;MC56;MDU2;MDU3;MIC4;Pgp1 |
| Description | CD44 molecule (Indian blood group) |
|---|---|
| Chromosome | 11p13 |
| Database Reference | MIM:107269 HGNC:1681 HPRD:00115 Vega:OTTHUMG00000044388 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| CD44 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.065 | 4.686 |
| LNCaP cell | 0.02 | 0.113 | 0.174 |
| NG2-sorted cell from blood | 40.922 | 150.843 | 426.151 |
| PC3 cell | 109.808 | 161.14 | 207.333 |
| Primary melanocyte | 214.766 | 535.3 | 855.834 |
| SKMEL5 cell | 151.639 | 217.095 | 327.049 |
| T24 cell | 688.475 | 695.901 | 893.431 |
| UACC257 cell | 209.346 | 233.669 | 283.307 |
| Comparing CD44 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.00146388249616763 |
| Embryonic stem cell VS PC3 cell | 0.00914438084427286 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.00631315721100676 |
| Embryonic stem cell VS T24 cell | 0.00242985632838849 |
| Embryonic stem cell VS UACC257 cell | 0.026241318642272 |
| LNCaP cell VS NG2-sorted cell from blood | 1.08024148483186e-05 |
| LNCaP cell VS PC3 cell | 1.56352964688143e-05 |
| LNCaP cell VS Primary melanocyte | 0.00334154809571789 |
| LNCaP cell VS SKMEL5 cell | 8.84854589825435e-06 |
| LNCaP cell VS T24 cell | 7.95178093357664e-07 |
| LNCaP cell VS UACC257 cell | 7.10748362314265e-05 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
