gene,0,0 GSM967508,0,0 GSM967509,0,0.078 GSM967510,0,28.057 GSM967511,0,79.234 GSM967512,0,0.097 GSM967513,0,0.05 GSM967514,0,0.101 GSM967515,0,1.171 GSM967516,0,32.06 GSM967517,0,28.235 GSM967518,0,0.043 GSM967519,0,0.13 GSM967520,0,6.271 GSM967521,0,0.548 GSM967535,0,0.074 GSM967536,0,0.036 GSM967537,0,0.068 GSM967538,0,0.11 GSM967539,0,0.033 GSM967540,0,0 GSM967541,0,44.256 GSM967542,0,47.445 GSM967543,0,21.465 GSM967544,0,21.501 GSM967545,0,9.066 GSM967546,0,15.326 GSM967547,0,35.516 GSM967548,0,5.376 GSM967549,0,76.471 GSM967550,0,6.417 GSM967551,0,12.489 GSM967552,0,8.292 GSM967553,0,0.036 GSM967554,0,2.334 GSM967555,0,165.551 GSM967556,0,0.957 GSM967557,0,37.918
| Synonyms | CDG2L;COD2;SHNS |
| Description | component of oligomeric golgi complex 6 |
|---|---|
| Chromosome | 13q14.11 |
| Database Reference | MIM:606977 HGNC:18621 HPRD:08445 Vega:OTTHUMG00000016768 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| COG6 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.099 | 79.234 |
| LNCaP cell | 0.043 | 3.41 | 32.06 |
| NG2-sorted cell from blood | 0 | 0.052 | 0.11 |
| PC3 cell | 21.465 | 32.878 | 47.445 |
| Primary melanocyte | 9.066 | 12.196 | 15.326 |
| SKMEL5 cell | 5.376 | 20.967 | 76.471 |
| T24 cell | 0.036 | 5.313 | 12.489 |
| UACC257 cell | 0.957 | 37.918 | 165.551 |
| Comparing COG6 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 0.0034121766442575 |
| Embryonic stem cell VS PC3 cell | NS |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | NS |
| Embryonic stem cell VS T24 cell | NS |
| Embryonic stem cell VS UACC257 cell | NS |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | NS |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.000681340441247109 |
| NG2-sorted cell from blood VS Primary melanocyte | 0.0487718547441263 |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.00317475976503855 |
| NG2-sorted cell from blood VS T24 cell | 0.00384235991592378 |
| NG2-sorted cell from blood VS UACC257 cell | 0.0131831351971488 |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
