gene,0,0 GSM1643170,0,17.859 GSM1643171,0,16.64 GSM1643147,0,9.676 GSM1643148,0,18.123 GSM1643172,0,17.291 GSM1643173,0,6.043 GSM1643174,0,8.755 GSM1643175,0,9.785 GSM1643176,0,6.856 GSM1643149,0,4.324 GSM1643150,0,3.026 GSM1643177,0,4.596 GSM1643178,0,4.01 GSM1643179,0,4.287 GSM1643151,0,0.866 GSM1643152,0,0 GSM1643157,0,3.735 GSM1643158,0,3.168 GSM1643163,0,0.174 GSM1643164,0,0.619 GSM1643153,0,1.386 GSM1643154,0,1.561 GSM1643143,0,35.127 GSM1643144,0,36.836 GSM1643155,0,42.811 GSM1643156,0,39.193 GSM1643159,0,37.108 GSM1643160,0,39.7 GSM1643165,0,43.688 GSM1643166,0,38.498 GSM1643167,0,48.566 GSM1643168,0,40.635 GSM1643169,0,37.046 GSM1643145,0,14.965 GSM1643146,0,5.355 GSM1643161,0,6.311 GSM1643162,0,9.261
| Synonyms | DJ149L1.1.2;EDM6;MED;STL4 |
| Description | collagen type IX alpha 1 |
|---|---|
| Chromosome | 6q13 |
| Database Reference | MIM:120210 HGNC:2217 HPRD:00367 Vega:OTTHUMG00000014988 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| COL9A1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 16.64 | 17.25 | 17.859 |
| d2 BTAG+ cells | 6.043 | 9.676 | 18.123 |
| d4 AG+ cells | 6.856 | 8.32 | 9.785 |
| d4 BTAG+ cells | 3.026 | 4.287 | 4.596 |
| d6 BTAG+ cells | 0 | 2.017 | 3.735 |
| d6 CSM+ cells | 0.174 | 0.396 | 0.619 |
| d8 BTAG+ cells | 1.386 | 1.473 | 1.561 |
| hiPSC | 35.127 | 39.193 | 48.566 |
| iMeLC | 5.355 | 7.786 | 14.965 |
| Comparing COL9A1 expression between groups | FDR |
|---|---|
| d2 AG+ cells VS d2 BTAG+ cells | NS |
| d2 AG+ cells VS d4 AG+ cells | NS |
| d2 AG+ cells VS d4 BTAG+ cells | 0.0327084861810712 |
| d2 AG+ cells VS d6 BTAG+ cells | NS |
| d2 AG+ cells VS d6 CSM+ cells | NS |
| d2 AG+ cells VS d8 BTAG+ cells | NS |
| d2 AG+ cells VS hiPSC | 8.86377842052728e-05 |
| d2 AG+ cells VS iMeLC | NS |
| d2 BTAG+ cells VS d4 AG+ cells | NS |
| d2 BTAG+ cells VS d4 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 CSM+ cells | NS |
| d2 BTAG+ cells VS d8 BTAG+ cells | NS |
| d2 BTAG+ cells VS hiPSC | 6.84256203654291e-06 |
| d2 BTAG+ cells VS iMeLC | NS |
| d4 AG+ cells VS d4 BTAG+ cells | NS |
| d4 AG+ cells VS d6 BTAG+ cells | NS |
| d4 AG+ cells VS d6 CSM+ cells | NS |
| d4 AG+ cells VS d8 BTAG+ cells | NS |
| d4 AG+ cells VS hiPSC | 1.32761058918726e-05 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
