gene,0,0 GSM967508,0,0 GSM967509,0,0 GSM967510,0,0 GSM967511,0,0.078 GSM967512,0,0.066 GSM967513,0,0 GSM967514,0,0.069 GSM967515,0,0.077 GSM967516,0,0.058 GSM967517,0,0.22 GSM967518,0,0.364 GSM967519,0,0 GSM967520,0,0.112 GSM967521,0,0 GSM967535,0,78.656 GSM967536,0,13.9 GSM967537,0,0 GSM967538,0,45.069 GSM967539,0,17.491 GSM967540,0,88.48 GSM967541,0,9.046 GSM967542,0,14.886 GSM967543,0,0.129 GSM967544,0,19.772 GSM967545,0,199.476 GSM967546,0,157.637 GSM967547,0,83.05 GSM967548,0,94.536 GSM967549,0,66.453 GSM967550,0,64.346 GSM967551,0,0 GSM967552,0,10.909 GSM967553,0,4.358 GSM967554,0,0 GSM967555,0,8.458 GSM967556,0,179.512 GSM967557,0,43.778
| Synonyms | URBWD |
| Description | extracellular matrix protein 1 |
|---|---|
| Chromosome | 1q21 |
| Database Reference | MIM:602201 HGNC:3153 HPRD:03727 Vega:OTTHUMG00000012806 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| ECM1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 0 | 0.033 | 0.078 |
| LNCaP cell | 0 | 0.085 | 0.364 |
| NG2-sorted cell from blood | 0 | 31.28 | 88.48 |
| PC3 cell | 0.129 | 11.966 | 19.772 |
| Primary melanocyte | 157.637 | 178.557 | 199.476 |
| SKMEL5 cell | 64.346 | 74.751 | 94.536 |
| T24 cell | 0 | 2.179 | 10.909 |
| UACC257 cell | 8.458 | 43.778 | 179.512 |
| Comparing ECM1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | 1.97646086952132e-05 |
| Embryonic stem cell VS PC3 cell | 0.000556223058838708 |
| Embryonic stem cell VS Primary melanocyte | 0.00294049394733298 |
| Embryonic stem cell VS SKMEL5 cell | 5.9766438805818e-05 |
| Embryonic stem cell VS T24 cell | 0.00366944151982168 |
| Embryonic stem cell VS UACC257 cell | 0.000990653705839922 |
| LNCaP cell VS NG2-sorted cell from blood | 0.00029498227313171 |
| LNCaP cell VS PC3 cell | 0.00730573976470081 |
| LNCaP cell VS Primary melanocyte | 0.0209756860529043 |
| LNCaP cell VS SKMEL5 cell | 0.00065508316967393 |
| LNCaP cell VS T24 cell | 0.0439529546579243 |
| LNCaP cell VS UACC257 cell | 0.0101080076608964 |
| NG2-sorted cell from blood VS PC3 cell | NS |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | NS |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
