gene,0,0 GSM967508,0,403.166 GSM967509,0,1246.654 GSM967510,0,1084.61 GSM967511,0,576.366 GSM967512,0,648.707 GSM967513,0,801.202 GSM967514,0,1315.723 GSM967515,0,704.582 GSM967516,0,801.965 GSM967517,0,356.512 GSM967518,0,343.617 GSM967519,0,1160.544 GSM967520,0,1017.769 GSM967521,0,123.796 GSM967535,0,649.675 GSM967536,0,309.575 GSM967537,0,500.927 GSM967538,0,843.765 GSM967539,0,560.021 GSM967540,0,526.685 GSM967541,0,63.744 GSM967542,0,127.767 GSM967543,0,51.693 GSM967544,0,251.26 GSM967545,0,241.644 GSM967546,0,71.472 GSM967547,0,166.386 GSM967548,0,104.078 GSM967549,0,152.74 GSM967550,0,62.523 GSM967551,0,172.315 GSM967552,0,355.155 GSM967553,0,26.904 GSM967554,0,13.271 GSM967555,0,180.322 GSM967556,0,350.802 GSM967557,0,221.438
| Synonyms | DGPT;ERG9;SQS;SS |
| Description | farnesyl-diphosphate farnesyltransferase 1 |
|---|---|
| Chromosome | 8p23.1-p22 |
| Database Reference | MIM:184420 HGNC:3629 HPRD:01694 Vega:OTTHUMG00000090801 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE38495 |
| FDFT1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| Embryonic stem cell | 403.166 | 752.892 | 1,315.723 |
| LNCaP cell | 123.796 | 579.238 | 1,160.544 |
| NG2-sorted cell from blood | 309.575 | 543.353 | 843.765 |
| PC3 cell | 51.693 | 95.755 | 251.26 |
| Primary melanocyte | 71.472 | 156.558 | 241.644 |
| SKMEL5 cell | 62.523 | 128.409 | 166.386 |
| T24 cell | 13.271 | 99.609 | 355.155 |
| UACC257 cell | 180.322 | 221.438 | 350.802 |
| Comparing FDFT1 expression between groups | FDR |
|---|---|
| Embryonic stem cell VS LNCaP cell | NS |
| Embryonic stem cell VS NG2-sorted cell from blood | NS |
| Embryonic stem cell VS PC3 cell | 0.00643028049063812 |
| Embryonic stem cell VS Primary melanocyte | NS |
| Embryonic stem cell VS SKMEL5 cell | 0.00141446817962316 |
| Embryonic stem cell VS T24 cell | 0.0352944311915935 |
| Embryonic stem cell VS UACC257 cell | 0.0392989090321836 |
| LNCaP cell VS NG2-sorted cell from blood | NS |
| LNCaP cell VS PC3 cell | NS |
| LNCaP cell VS Primary melanocyte | NS |
| LNCaP cell VS SKMEL5 cell | 0.0375913676919368 |
| LNCaP cell VS T24 cell | NS |
| LNCaP cell VS UACC257 cell | NS |
| NG2-sorted cell from blood VS PC3 cell | 0.0405203834750753 |
| NG2-sorted cell from blood VS Primary melanocyte | NS |
| NG2-sorted cell from blood VS SKMEL5 cell | 0.014117391577285 |
| NG2-sorted cell from blood VS T24 cell | NS |
| NG2-sorted cell from blood VS UACC257 cell | NS |
| PC3 cell VS Primary melanocyte | NS |
| PC3 cell VS SKMEL5 cell | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others Embryonic stem cell[8]
LNCaP cell[6]
NG2-sorted cell from blood[6]
PC3 cell[4]
Primary melanocyte[2]
SKMEL5 cell[4]
T24 cell[4]
UACC257 cell[3]
