gene,0,0 GSM1643170,0,33.438 GSM1643171,0,54.081 GSM1643147,0,48.165 GSM1643148,0,25.674 GSM1643172,0,45.287 GSM1643173,0,55.809 GSM1643174,0,33.814 GSM1643175,0,80.802 GSM1643176,0,56.637 GSM1643149,0,59.719 GSM1643150,0,24.211 GSM1643177,0,48.588 GSM1643178,0,51.824 GSM1643179,0,34.833 GSM1643151,0,57.132 GSM1643152,0,31.272 GSM1643157,0,46.783 GSM1643158,0,39.235 GSM1643163,0,42.918 GSM1643164,0,50.14 GSM1643153,0,44.127 GSM1643154,0,29.655 GSM1643143,0,19.342 GSM1643144,0,14.734 GSM1643155,0,22.653 GSM1643156,0,20.716 GSM1643159,0,17.577 GSM1643160,0,22.179 GSM1643165,0,17.31 GSM1643166,0,20.166 GSM1643167,0,19.057 GSM1643168,0,16.508 GSM1643169,0,14.359 GSM1643145,0,14.342 GSM1643146,0,16.066 GSM1643161,0,13.673 GSM1643162,0,12.808
| Synonyms | CPBHM;HD6;JM21;PPP1R90 |
| Description | histone deacetylase 6 |
|---|---|
| Chromosome | Xp11.23 |
| Database Reference | MIM:300272 HGNC:14064 HPRD:02228 Vega:OTTHUMG00000034496 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| HDAC6 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 33.438 | 43.76 | 54.081 |
| d2 BTAG+ cells | 25.674 | 45.287 | 55.809 |
| d4 AG+ cells | 56.637 | 68.72 | 80.802 |
| d4 BTAG+ cells | 24.211 | 48.588 | 59.719 |
| d6 BTAG+ cells | 31.272 | 43.009 | 57.132 |
| d6 CSM+ cells | 42.918 | 46.529 | 50.14 |
| d8 BTAG+ cells | 29.655 | 36.891 | 44.127 |
| hiPSC | 14.359 | 19.057 | 22.653 |
| iMeLC | 12.808 | 14.007 | 16.066 |
| Comparing HDAC6 expression between groups | FDR |
|---|---|
| d2 AG+ cells VS d2 BTAG+ cells | NS |
| d2 AG+ cells VS d4 AG+ cells | NS |
| d2 AG+ cells VS d4 BTAG+ cells | NS |
| d2 AG+ cells VS d6 BTAG+ cells | NS |
| d2 AG+ cells VS d6 CSM+ cells | NS |
| d2 AG+ cells VS d8 BTAG+ cells | NS |
| d2 AG+ cells VS hiPSC | 0.000222877639773648 |
| d2 AG+ cells VS iMeLC | 0.0347564337170815 |
| d2 BTAG+ cells VS d4 AG+ cells | NS |
| d2 BTAG+ cells VS d4 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 CSM+ cells | NS |
| d2 BTAG+ cells VS d8 BTAG+ cells | NS |
| d2 BTAG+ cells VS hiPSC | 3.76216012758764e-05 |
| d2 BTAG+ cells VS iMeLC | 0.00951889186708562 |
| d4 AG+ cells VS d4 BTAG+ cells | NS |
| d4 AG+ cells VS d6 BTAG+ cells | NS |
| d4 AG+ cells VS d6 CSM+ cells | NS |
| d4 AG+ cells VS d8 BTAG+ cells | NS |
| d4 AG+ cells VS hiPSC | 1.60655664473069e-06 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
