gene,0,0 GSM1643170,0,52.817 GSM1643171,0,74.561 GSM1643147,0,28.383 GSM1643148,0,34.735 GSM1643172,0,74.929 GSM1643173,0,80.692 GSM1643174,0,100.536 GSM1643175,0,71.964 GSM1643176,0,73.926 GSM1643149,0,73.77 GSM1643150,0,86.251 GSM1643177,0,81.417 GSM1643178,0,91.926 GSM1643179,0,71.542 GSM1643151,0,58.575 GSM1643152,0,86.37 GSM1643157,0,43.245 GSM1643158,0,34.605 GSM1643163,0,29.191 GSM1643164,0,46.674 GSM1643153,0,51.751 GSM1643154,0,68.674 GSM1643143,0,13.784 GSM1643144,0,13.261 GSM1643155,0,9.983 GSM1643156,0,6.159 GSM1643159,0,10.416 GSM1643160,0,9.759 GSM1643165,0,9.067 GSM1643166,0,15.399 GSM1643167,0,10.144 GSM1643168,0,22.434 GSM1643169,0,7.467 GSM1643145,0,5.3 GSM1643146,0,5.355 GSM1643161,0,4.207 GSM1643162,0,6.305
| Synonyms | HD7;HD7b;HD9;HDAC;HDAC7;HDAC7B;HDAC9B;HDAC9FL;HDRP;MITR |
| Description | histone deacetylase 9 |
|---|---|
| Chromosome | 7p21.1 |
| Database Reference | MIM:606543 HGNC:14065 HPRD:05944 Vega:OTTHUMG00000152487 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| HDAC9 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 52.817 | 63.689 | 74.561 |
| d2 BTAG+ cells | 28.383 | 74.929 | 100.536 |
| d4 AG+ cells | 71.964 | 72.945 | 73.926 |
| d4 BTAG+ cells | 71.542 | 81.417 | 91.926 |
| d6 BTAG+ cells | 34.605 | 50.91 | 86.37 |
| d6 CSM+ cells | 29.191 | 37.933 | 46.674 |
| d8 BTAG+ cells | 51.751 | 60.212 | 68.674 |
| hiPSC | 6.159 | 10.144 | 22.434 |
| iMeLC | 4.207 | 5.328 | 6.305 |
| Comparing HDAC9 expression between groups | FDR |
|---|---|
| d4 AG+ cells VS iMeLC | 0.00331109755552199 |
| d4 BTAG+ cells VS d6 BTAG+ cells | NS |
| d4 BTAG+ cells VS d6 CSM+ cells | NS |
| d4 BTAG+ cells VS d8 BTAG+ cells | NS |
| d4 BTAG+ cells VS hiPSC | 2.69733391174942e-08 |
| d4 BTAG+ cells VS iMeLC | 0.000248631597486048 |
| d6 BTAG+ cells VS d6 CSM+ cells | NS |
| d6 BTAG+ cells VS d8 BTAG+ cells | NS |
| d6 BTAG+ cells VS hiPSC | 3.69158280303098e-05 |
| d6 BTAG+ cells VS iMeLC | 0.00431631065340699 |
| d6 CSM+ cells VS d8 BTAG+ cells | NS |
| d6 CSM+ cells VS hiPSC | 0.00213845999004025 |
| d6 CSM+ cells VS iMeLC | 0.0165091755971134 |
| d8 BTAG+ cells VS hiPSC | 1.87286501427856e-05 |
| d8 BTAG+ cells VS iMeLC | 0.0100685208902362 |
| hiPSC VS iMeLC | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
