gene,0,0 GSM1643170,0,343.883 GSM1643171,0,278.405 GSM1643147,0,460.58 GSM1643148,0,418.327 GSM1643172,0,292.305 GSM1643173,0,277.268 GSM1643174,0,292.551 GSM1643175,0,210.527 GSM1643176,0,152.622 GSM1643149,0,460.185 GSM1643150,0,440.333 GSM1643177,0,226.852 GSM1643178,0,188.788 GSM1643179,0,152.999 GSM1643151,0,294.606 GSM1643152,0,260.6 GSM1643157,0,399.818 GSM1643158,0,362.136 GSM1643163,0,265.327 GSM1643164,0,275.586 GSM1643153,0,288.787 GSM1643154,0,246.602 GSM1643143,0,130.283 GSM1643144,0,113.454 GSM1643155,0,118.066 GSM1643156,0,132.697 GSM1643159,0,128.466 GSM1643160,0,139.505 GSM1643165,0,110.457 GSM1643166,0,136.025 GSM1643167,0,132.172 GSM1643168,0,115.132 GSM1643169,0,137.272 GSM1643145,0,168.67 GSM1643146,0,159.319 GSM1643161,0,156.294 GSM1643162,0,149.753
| Synonyms | D6S204;HLA-JY3;HLAC;HLC-C;MHC;PSORS1 |
| Description | major histocompatibility complex, class I, C |
|---|---|
| Chromosome | 6p21.3 |
| Database Reference | MIM:142840 HGNC:4933 HPRD:00829 Vega:OTTHUMG00000031154 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| HLA-C expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 278.405 | 311.144 | 343.883 |
| d2 BTAG+ cells | 277.268 | 292.551 | 460.58 |
| d4 AG+ cells | 152.622 | 181.575 | 210.527 |
| d4 BTAG+ cells | 152.999 | 226.852 | 460.185 |
| d6 BTAG+ cells | 260.6 | 328.371 | 399.818 |
| d6 CSM+ cells | 265.327 | 270.457 | 275.586 |
| d8 BTAG+ cells | 246.602 | 267.695 | 288.787 |
| hiPSC | 110.457 | 130.283 | 139.505 |
| iMeLC | 149.753 | 157.807 | 168.67 |
| Comparing HLA-C expression between groups | FDR |
|---|---|
| d4 AG+ cells VS iMeLC | NS |
| d4 BTAG+ cells VS d6 BTAG+ cells | NS |
| d4 BTAG+ cells VS d6 CSM+ cells | NS |
| d4 BTAG+ cells VS d8 BTAG+ cells | NS |
| d4 BTAG+ cells VS hiPSC | 0.000350022737399573 |
| d4 BTAG+ cells VS iMeLC | NS |
| d6 BTAG+ cells VS d6 CSM+ cells | NS |
| d6 BTAG+ cells VS d8 BTAG+ cells | NS |
| d6 BTAG+ cells VS hiPSC | 1.36906966173304e-07 |
| d6 BTAG+ cells VS iMeLC | 0.00544551852678968 |
| d6 CSM+ cells VS d8 BTAG+ cells | NS |
| d6 CSM+ cells VS hiPSC | 2.75083886027148e-07 |
| d6 CSM+ cells VS iMeLC | 0.00800810125597678 |
| d8 BTAG+ cells VS hiPSC | 1.08662159916536e-06 |
| d8 BTAG+ cells VS iMeLC | 0.0188842913613679 |
| hiPSC VS iMeLC | 0.00275088057303728 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
