gene,0,0 GSM1643170,0,28.499 GSM1643171,0,27.201 GSM1643147,0,24.083 GSM1643148,0,34.735 GSM1643172,0,30.054 GSM1643173,0,13.508 GSM1643174,0,48.004 GSM1643175,0,89.64 GSM1643176,0,84.36 GSM1643149,0,73.77 GSM1643150,0,39.343 GSM1643177,0,58.108 GSM1643178,0,90.384 GSM1643179,0,108.519 GSM1643151,0,122.344 GSM1643152,0,83.392 GSM1643157,0,89.635 GSM1643158,0,82.37 GSM1643163,0,82.361 GSM1643164,0,84.682 GSM1643153,0,184.593 GSM1643154,0,113.936 GSM1643143,0,2.446 GSM1643144,0,2.947 GSM1643155,0,6.143 GSM1643156,0,3.359 GSM1643159,0,5.425 GSM1643160,0,2.218 GSM1643165,0,4.534 GSM1643166,0,6.6 GSM1643167,0,6.148 GSM1643168,0,7.619 GSM1643169,0,6.892 GSM1643145,0,6.859 GSM1643146,0,8.033 GSM1643161,0,3.997 GSM1643162,0,5.123
| Synonyms | CELIAC1;HLA-DQB;HLA-DRB1;IDDM1 |
| Description | major histocompatibility complex, class II, DQ beta 1 |
|---|---|
| Chromosome | 6p21.3 |
| Database Reference | MIM:604305 HGNC:4944 HPRD:05054 Vega:OTTHUMG00000031124 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67259 |
| HLA-DQB1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| d2 AG+ cells | 27.201 | 27.85 | 28.499 |
| d2 BTAG+ cells | 13.508 | 30.054 | 48.004 |
| d4 AG+ cells | 84.36 | 87 | 89.64 |
| d4 BTAG+ cells | 39.343 | 73.77 | 108.519 |
| d6 BTAG+ cells | 82.37 | 86.513 | 122.344 |
| d6 CSM+ cells | 82.361 | 83.521 | 84.682 |
| d8 BTAG+ cells | 113.936 | 149.265 | 184.593 |
| hiPSC | 2.218 | 5.425 | 7.619 |
| iMeLC | 3.997 | 5.991 | 8.033 |
| Comparing HLA-DQB1 expression between groups | FDR |
|---|---|
| d2 AG+ cells VS d2 BTAG+ cells | NS |
| d2 AG+ cells VS d4 AG+ cells | NS |
| d2 AG+ cells VS d4 BTAG+ cells | NS |
| d2 AG+ cells VS d6 BTAG+ cells | NS |
| d2 AG+ cells VS d6 CSM+ cells | NS |
| d2 AG+ cells VS d8 BTAG+ cells | NS |
| d2 AG+ cells VS hiPSC | 1.2608088480165e-05 |
| d2 AG+ cells VS iMeLC | 0.016684126348292 |
| d2 BTAG+ cells VS d4 AG+ cells | NS |
| d2 BTAG+ cells VS d4 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 BTAG+ cells | NS |
| d2 BTAG+ cells VS d6 CSM+ cells | NS |
| d2 BTAG+ cells VS d8 BTAG+ cells | NS |
| d2 BTAG+ cells VS hiPSC | 7.68966321114497e-06 |
| d2 BTAG+ cells VS iMeLC | 0.0128470700604373 |
| d4 AG+ cells VS d4 BTAG+ cells | NS |
| d4 AG+ cells VS d6 BTAG+ cells | NS |
| d4 AG+ cells VS d6 CSM+ cells | NS |
| d4 AG+ cells VS d8 BTAG+ cells | NS |
| d4 AG+ cells VS hiPSC | 2.3242198386601e-08 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others d2 AG+ cells[2]
d2 BTAG+ cells[5]
d4 AG+ cells[2]
d4 BTAG+ cells[5]
d6 BTAG+ cells[4]
d6 CSM+ cells[2]
d8 BTAG+ cells[2]
hiPSC[11]
iMeLC[4]
