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Gene View

General Information

HMGB1[ENSG00000189403]

SynonymsHMG-1;HMG1;HMG3;SBP-1
Descriptionhigh mobility group box 1
Chromosome13q12
Database ReferenceMIM:163905 HGNC:4983 HPRD:01228 Vega:OTTHUMG00000016670 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
HMGB1 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]0469.7521,506.047
fetal human cortex 1[12 weeks post-conception]205.475598.8271,148.193
fetal human cortex 2[13 weeks post-conception]142.349588.826979.619
iPSC 409B2[33 days]288.187373.728587.077
iPSC 409B2[35 days]237.973365.369680.372
iPSC 409B2[37 days]271.829366.484509.177
iPSC 409B2[41 days]0404.483811.023
iPSC 409B2[58 days]184.372463.516834.343
iPSC 409B2[65 days]219.334422.1351,160.797
Displaying 1-20 of 36 results.
Comparing HMGB1 expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]0.000987941822913196
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]0.0399223232754218
ESC H9[53 days] VS iPSC 409B2[33 days]0.00836093144318769
ESC H9[53 days] VS iPSC 409B2[35 days]1.44752046007838e-05
ESC H9[53 days] VS iPSC 409B2[37 days]3.70895495841053e-07
ESC H9[53 days] VS iPSC 409B2[41 days]0.0202490586508991
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]1.28264284301572e-20
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]2.66417649726767e-32
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]2.28511463068198e-40
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]8.02047397810947e-18
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]3.90399159122699e-12
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]1.69986715774379e-12
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]1.04950933679462e-13
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]5.12343076436623e-20
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]4.03752468433329e-27
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]1.23097784707232e-09
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]4.99738351527411e-07
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for HMGB1

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]