gene,0,0 GSM1160120,0,121.582 GSM1160121,0,93.182 GSM1160122,0,85.544 GSM1160123,0,177.78 GSM1160124,0,148.84 GSM1160125,0,166.469 GSM1160126,0,190.634 GSM1160127,0,133.882 GSM1160128,0,69.828 GSM1160129,0,59.854 GSM1160130,0,39.497 GSM1160131,0,63.585 GSM1160132,0,229.473 GSM1160133,0,83.607 GSM1160134,0,112.802 GSM1160135,0,66.908 GSM1160136,0,40.906 GSM1160138,0,78.946 GSM1160139,0,59.826 GSM1160140,0,46.939 GSM1160112,0,40.391 GSM1160113,0,45.086 GSM1160114,0,38.082 GSM1160115,0,13.787 GSM1160116,0,8.583 GSM1160117,0,35.603 GSM1160118,0,39.979 GSM1160119,0,33.607
| Synonyms | HMG-2a;HMG-4;HMG2A;HMG4 |
| Description | high mobility group box 3 |
|---|---|
| Chromosome | Xq28 |
| Database Reference | MIM:300193 HGNC:5004 HPRD:02181 Vega:OTTHUMG00000024162 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE44183 |
| HMGB3 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| 2-cell blastomere | 85.544 | 93.182 | 121.582 |
| 4-cell blastomere | 148.84 | 172.125 | 190.634 |
| 8-cell blastomere | 39.497 | 68.368 | 229.473 |
| morula | 46.939 | 59.826 | 78.946 |
| oocyte | 38.082 | 40.391 | 45.086 |
| pronucleus | 8.583 | 13.787 | 35.603 |
| zygote | 33.607 | 36.793 | 39.979 |
| Comparing HMGB3 expression between groups | FDR |
|---|---|
| 2-cell blastomere VS 4-cell blastomere | NS |
| 2-cell blastomere VS 8-cell blastomere | NS |
| 2-cell blastomere VS morula | NS |
| 2-cell blastomere VS oocyte | NS |
| 2-cell blastomere VS pronucleus | NS |
| 2-cell blastomere VS zygote | NS |
| 4-cell blastomere VS 8-cell blastomere | NS |
| 4-cell blastomere VS morula | 0.0161000191757325 |
| 4-cell blastomere VS oocyte | 0.0062755945937757 |
| 4-cell blastomere VS pronucleus | 0.015953199801901 |
| 4-cell blastomere VS zygote | 0.0109765153379043 |
| 8-cell blastomere VS morula | NS |
| 8-cell blastomere VS oocyte | NS |
| 8-cell blastomere VS pronucleus | NS |
| 8-cell blastomere VS zygote | NS |
| morula VS oocyte | NS |
| morula VS pronucleus | NS |
| morula VS zygote | NS |
| oocyte VS pronucleus | NS |
| oocyte VS zygote | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others 2-cell blastomere[3]
4-cell blastomere[4]
8-cell blastomere[10]
morula[3]
oocyte[3]
pronucleus[3]
zygote[2]
