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Gene View

General Information

HMGB3[ENSG00000029993]

SynonymsHMG-2a;HMG-4;HMG2A;HMG4
Descriptionhigh mobility group box 3
ChromosomeXq28
Database ReferenceMIM:300193 HGNC:5004 HPRD:02181 Vega:OTTHUMG00000024162 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE75140

Gene Rank

Gene Expression

 

Displaying 1-9 of 9 results.
HMGB3 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
ESC H9[53 days]0365.1741,115.379
fetal human cortex 1[12 weeks post-conception]09.5391,106.673
fetal human cortex 2[13 weeks post-conception]00809.572
iPSC 409B2[33 days]0328.797538.751
iPSC 409B2[35 days]0297.963438.955
iPSC 409B2[37 days]0.705322.278488.659
iPSC 409B2[41 days]0256.441640.078
iPSC 409B2[58 days]0349.325629.771
iPSC 409B2[65 days]0350.6591,389.598
Displaying 1-20 of 36 results.
Comparing HMGB3 expression between groupsFDR
ESC H9[53 days] VS fetal human cortex 1[12 weeks post-conception]0.000365832780527528
ESC H9[53 days] VS fetal human cortex 2[13 weeks post-conception]0.00170657204482464
ESC H9[53 days] VS iPSC 409B2[33 days]NS
ESC H9[53 days] VS iPSC 409B2[35 days]NS
ESC H9[53 days] VS iPSC 409B2[37 days]NS
ESC H9[53 days] VS iPSC 409B2[41 days]0.00137821352076561
ESC H9[53 days] VS iPSC 409B2[58 days]NS
ESC H9[53 days] VS iPSC 409B2[65 days]NS
fetal human cortex 1[12 weeks post-conception] VS fetal human cortex 2[13 weeks post-conception]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[33 days]0.0434243754739098
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[35 days]0.0381664539542637
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[37 days]0.00639445191673008
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[41 days]NS
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[58 days]0.0050527105682867
fetal human cortex 1[12 weeks post-conception] VS iPSC 409B2[65 days]0.00549191794062228
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[33 days]0.0436565652300016
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[35 days]0.0288128612785655
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[37 days]0.00627850236419676
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[41 days]NS
fetal human cortex 2[13 weeks post-conception] VS iPSC 409B2[58 days]0.00818006453530739
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for HMGB3

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 ESC H9[53 days][96]
 fetal human cortex 1[12 weeks post-conception][164]
 fetal human cortex 2[13 weeks post-conception][62]
 iPSC 409B2[33 days][40]
 iPSC 409B2[35 days][68]
 iPSC 409B2[37 days][71]
 iPSC 409B2[41 days][74]
 iPSC 409B2[58 days][79]
 iPSC 409B2[65 days][80]