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GSM1657982,0,483 GSM1657983,0,248 GSM1657984,0,316 GSM1657985,0,49 GSM1657986,0,143 GSM1657987,0,165 GSM1657988,0,18 GSM1657989,0,69 GSM1657990,0,254 GSM1657991,0,716 GSM1658001,0,0 GSM1658002,0,387 GSM1658005,0,162 GSM1658009,0,548 GSM1658012,0,156 GSM1658014,0,304 GSM1658025,0,141 GSM1658032,0,94 GSM1658033,0,78 GSM1658034,0,272 GSM1658035,0,235 GSM1658037,0,3 GSM1658038,0,59 GSM1658039,0,0 GSM1658040,0,45 GSM1658041,0,184 GSM1658042,0,78 GSM1658046,0,378 GSM1658052,0,196 GSM1658058,0,235 GSM1658063,0,275 GSM1658080,0,154 GSM1658084,0,32 GSM1658087,0,118 GSM1658090,0,16 GSM1658091,0,103 GSM1658095,0,87 GSM1658101,0,0 GSM1658103,0,128 GSM1658104,0,65 GSM1658105,0,113 GSM1658106,0,764 GSM1658107,0,98 GSM1658108,0,67 GSM1658110,0,171 GSM1658111,0,0 GSM1658113,0,44 GSM1658114,0,0 GSM1658115,0,94 GSM1658127,0,470 GSM1658128,0,19 GSM1658129,0,542 GSM1658131,0,22 GSM1658134,0,97 GSM1658135,0,104 GSM1658136,0,4 GSM1658137,0,131 GSM1658138,0,112 GSM1658139,0,6 GSM1658141,0,36 GSM1658143,0,32 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| Synonyms | PNAS-24;PNAS-25;TRIP7 |
| Description | high mobility group nucleosomal binding domain 3 |
|---|---|
| Chromosome | 6q14.1 |
| Database Reference | MIM:604502 HGNC:12312 HPRD:16062 Vega:OTTHUMG00000015073 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE67835 |
| HMGN3 expression in each cell group | Minimum Value (Read count) | Median Value (Read count) | Maximum Value (Read count) |
|---|---|---|---|
| cortex astrocytes | 0 | 230.5 | 1,860 |
| cortex endothelial | 0 | 76 | 495 |
| cortex fetal-quiescent | 0 | 10 | 1,038 |
| cortex fetal-replicating | 0 | 139 | 1,548 |
| cortex hybrid | 0 | 263.5 | 670 |
| cortex microglia | 0 | 0 | 9 |
| cortex neurons | 0 | 111.5 | 957 |
| cortex oligodendrocytes | 0 | 58.5 | 976 |
| cortex OPC | 1 | 14 | 27 |
| hippocampus endothelial | 0 | 34 | 96 |
| hippocampus hybrid | 114 | 160 | 206 |
| hippocampus microglia | 0 | 6 | 141 |
| hippocampus neurons | 65 | 65 | 65 |
| hippocampus oligodendrocytes | 0 | 30 | 173 |
| hippocampus OPC | 0 | 34 | 715 |
| Comparing HMGN3 expression between groups | FDR |
|---|---|
| cortex OPC VS hippocampus OPC | NS |
| cortex OPC VS hippocampus endothelial | NS |
| cortex OPC VS hippocampus hybrid | NS |
| cortex OPC VS hippocampus microglia | NS |
| cortex OPC VS hippocampus neurons | NS |
| cortex OPC VS hippocampus oligodendrocytes | NS |
| cortex astrocytes VS cortex OPC | NS |
| cortex astrocytes VS cortex endothelial | NS |
| cortex astrocytes VS cortex fetal-quiescent | 6.56072651549587e-06 |
| cortex astrocytes VS cortex fetal-replicating | NS |
| cortex astrocytes VS cortex hybrid | NS |
| cortex astrocytes VS cortex microglia | 4.0767716186698e-11 |
| cortex astrocytes VS cortex neurons | 0.000255012132606817 |
| cortex astrocytes VS cortex oligodendrocytes | 0.0376630568647834 |
| cortex astrocytes VS hippocampus OPC | 0.0198546136719839 |
| cortex astrocytes VS hippocampus endothelial | NS |
| cortex astrocytes VS hippocampus hybrid | NS |
| cortex astrocytes VS hippocampus microglia | 7.40303548341842e-05 |
| cortex astrocytes VS hippocampus neurons | NS |
| cortex astrocytes VS hippocampus oligodendrocytes | 0.0274139595953522 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others cortex astrocytes[62]
cortex endothelial[17]
cortex fetal-quiescent[110]
cortex fetal-replicating[25]
cortex hybrid[44]
cortex microglia[8]
cortex neurons[130]
cortex oligodendrocytes[32]
cortex OPC[2]
hippocampus endothelial[3]
hippocampus hybrid[2]
hippocampus microglia[8]
hippocampus neurons[1]
hippocampus oligodendrocytes[6]
hippocampus OPC[16]
