gene,0,0 GSM1160120,0,1646.482 GSM1160121,0,845.703 GSM1160122,0,1201.997 GSM1160123,0,826.482 GSM1160124,0,694.563 GSM1160125,0,694.563 GSM1160126,0,686.756 GSM1160127,0,1201.328 GSM1160128,0,982.011 GSM1160129,0,1162.822 GSM1160130,0,638.658 GSM1160131,0,1851.629 GSM1160132,0,1024.993 GSM1160133,0,939.407 GSM1160134,0,725.229 GSM1160135,0,49.296 GSM1160136,0,85.969 GSM1160138,0,73.408 GSM1160139,0,7.403 GSM1160140,0,4.104 GSM1160112,0,15.328 GSM1160113,0,23.76 GSM1160114,0,26.877 GSM1160115,0,32.734 GSM1160116,0,5.419 GSM1160117,0,22.186 GSM1160118,0,26.562 GSM1160119,0,29.34
| Synonyms | EPLIN;SREBP3 |
| Description | LIM domain and actin binding 1 |
|---|---|
| Chromosome | 12q13 |
| Database Reference | MIM:608364 HGNC:24636 HPRD:09755 Vega:OTTHUMG00000169852 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE44183 |
| LIMA1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| 2-cell blastomere | 845.703 | 1,201.997 | 1,646.482 |
| 4-cell blastomere | 686.756 | 694.563 | 826.482 |
| 8-cell blastomere | 49.296 | 960.709 | 1,851.629 |
| morula | 4.104 | 7.403 | 73.408 |
| oocyte | 15.328 | 23.76 | 26.877 |
| pronucleus | 5.419 | 22.186 | 32.734 |
| zygote | 26.562 | 27.951 | 29.34 |
| Comparing LIMA1 expression between groups | FDR |
|---|---|
| 2-cell blastomere VS 4-cell blastomere | NS |
| 2-cell blastomere VS 8-cell blastomere | NS |
| 2-cell blastomere VS morula | NS |
| 2-cell blastomere VS oocyte | 0.0454993434411723 |
| 2-cell blastomere VS pronucleus | NS |
| 2-cell blastomere VS zygote | NS |
| 4-cell blastomere VS 8-cell blastomere | NS |
| 4-cell blastomere VS morula | 0.0238133989534589 |
| 4-cell blastomere VS oocyte | 0.00460923809519552 |
| 4-cell blastomere VS pronucleus | 0.00755647412906612 |
| 4-cell blastomere VS zygote | 0.00680536540475978 |
| 8-cell blastomere VS morula | 0.0137044774703196 |
| 8-cell blastomere VS oocyte | 0.00472256854569507 |
| 8-cell blastomere VS pronucleus | 0.00176072638700013 |
| 8-cell blastomere VS zygote | 0.00592453905408288 |
| morula VS oocyte | NS |
| morula VS pronucleus | NS |
| morula VS zygote | NS |
| oocyte VS pronucleus | NS |
| oocyte VS zygote | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others 2-cell blastomere[3]
4-cell blastomere[4]
8-cell blastomere[10]
morula[3]
oocyte[3]
pronucleus[3]
zygote[2]
