gene,0,0 GSM1833288,0,1968.548 GSM1833289,0,1854.457 GSM1833290,0,785.206 GSM1833291,0,1304.488 GSM1833292,0,1022.204 GSM1833294,0,941.426 GSM1833295,0,381.313 GSM1833296,0,596.432 GSM1833297,0,1013.634 GSM1833298,0,1048.579 GSM1833300,0,111.554 GSM1833302,0,90.566 GSM1833304,0,259.387 GSM1833316,0,27.396 GSM1833318,0,23.404 GSM1833321,0,51.208 GSM1833329,0,37.948 GSM1833330,0,33.016 GSM1833331,0,26.894 GSM1833326,0,25.034 GSM1833327,0,27.739 GSM1833328,0,26.501 GSM1833323,0,16.743 GSM1833324,0,6.36 GSM1833325,0,22.686 GSM1833279,0,1350.542 GSM1833280,0,929.584 GSM1833281,0,335.563 GSM1833282,0,322.006 GSM1833307,0,61.586 GSM1833309,0,74.442 GSM1833312,0,38.466 GSM1833314,0,16.889 GSM1985628,0,16.493 GSM1985629,0,95.056 GSM1985630,0,95.981 GSM1985631,0,45.627 GSM2151860,0,22.576 GSM2151861,0,22.053 GSM2151862,0,24.322 GSM1833332,0,57.543 GSM1833333,0,10.263 GSM1833334,0,9.484 GSM1833283,0,1220.973 GSM1833284,0,1215.611 GSM1833285,0,811.685 GSM1833286,0,1112.148 GSM1833287,0,981.524
| Synonyms | EPLIN;SREBP3 |
| Description | LIM domain and actin binding 1 |
|---|---|
| Chromosome | 12q13 |
| Database Reference | MIM:608364 HGNC:24636 HPRD:09755 Vega:OTTHUMG00000169852 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE71318 |
| LIMA1 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| human 2 cell | 785.206 | 1,579.472 | 1,968.548 |
| human 4 cell | 381.313 | 768.929 | 1,022.204 |
| human 8 cell | 90.566 | 259.387 | 1,048.579 |
| human early blastocsyt | 23.404 | 27.396 | 51.208 |
| human ICM | 26.894 | 33.016 | 37.948 |
| human late blastoycst | 25.034 | 26.501 | 27.739 |
| human middle blastocyst | 6.36 | 16.743 | 22.686 |
| human MII oocyte | 322.006 | 632.573 | 1,350.542 |
| human morula | 16.889 | 50.026 | 74.442 |
| human stem cells | 16.493 | 24.322 | 95.981 |
| human TE | 9.484 | 10.263 | 57.543 |
| human zygote | 811.685 | 1,112.148 | 1,220.973 |
| Comparing LIMA1 expression between groups | FDR |
|---|---|
| human 2 cell VS human 4 cell | NS |
| human 2 cell VS human 8 cell | NS |
| human 2 cell VS human ICM | 0.00320653648230209 |
| human 2 cell VS human MII oocyte | NS |
| human 2 cell VS human TE | 0.0114618277715498 |
| human 2 cell VS human early blastocsyt | 0.00648932971922087 |
| human 2 cell VS human late blastoycst | 0.005259708086297 |
| human 2 cell VS human middle blastocyst | 0.00718405622813298 |
| human 2 cell VS human morula | 0.00170234333396033 |
| human 2 cell VS human stem cells | 0.000332936815946001 |
| human 2 cell VS human zygote | NS |
| human 4 cell VS human 8 cell | NS |
| human 4 cell VS human ICM | 0.0107983556446478 |
| human 4 cell VS human MII oocyte | NS |
| human 4 cell VS human TE | 0.0280116684053279 |
| human 4 cell VS human early blastocsyt | 0.023967300593078 |
| human 4 cell VS human late blastoycst | 0.0103898850414943 |
| human 4 cell VS human middle blastocyst | 0.0200514466584731 |
| human 4 cell VS human morula | 0.00942323106013174 |
| human 4 cell VS human stem cells | 0.00182364402167497 |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others human 2 cell[4]
human 4 cell[4]
human 8 cell[5]
human early blastocsyt[3]
human ICM[3]
human late blastoycst[3]
human middle blastocyst[3]
human MII oocyte[4]
human morula[4]
human stem cells[7]
human TE[3]
human zygote[5]
