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General Information

LOC643406[]

Synonyms-
Descriptionuncharacterized LOC643406
Chromosome20p12.3
Database ReferenceHPRD:14595 
See relatedTHE HUMAN PROTEIN ATLAS
DatasetGSE72056

Gene Rank

Gene Expression

 

Displaying 1-8 of 8 results.
LOC643406 expression in each cell groupMinimum Value (TPM)Median Value (TPM)Maximum Value (TPM)
B-cell4.38224.2328,039.191
CAF073.2531,101.605
Endothelial cell0138.893747.724
Macrophage16.12171.815329.726
melanoma084.3424,326.538
melanoma tumor0228.45610,731.651
T-cell0203.7727,897.073
unresolved0129.0612,591.32
Displaying 1-20 of 28 results.
Comparing LOC643406 expression between groupsFDR
B-cell VS CAF0.0274903848540691
B-cell VS Endothelial cellNS
B-cell VS Macrophage0.000136271700371404
B-cell VS T-cellNS
B-cell VS melanoma tumorNS
B-cell VS melanoma1.0817673172851e-31
B-cell VS unresolved0.00225794655066019
CAF VS Endothelial cellNS
CAF VS MacrophageNS
CAF VS T-cellNS
CAF VS melanoma tumor0.00777332151961282
CAF VS melanomaNS
CAF VS unresolvedNS
Endothelial cell VS Macrophage0.00653124565156434
Endothelial cell VS T-cellNS
Endothelial cell VS melanoma tumor0.0212278912374686
Endothelial cell VS melanomaNS
Endothelial cell VS unresolvedNS
Macrophage VS T-cell0.000421208351626162
Macrophage VS melanoma tumor3.24116518868597e-05
NS represents no significant differential expression between two groups was detected by using the BPSC method.

Top 100 positive and negative correlated genes for LOC643406

Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.

KEGG GO Others   

 B-cell[326]
 CAF[39]
 Endothelial cell[40]
 Macrophage[42]
 melanoma[1071]
 melanoma tumor[246]
 T-cell[1302]
 unresolved[96]