gene,0,0 GSM1160120,0,75.373 GSM1160121,0,76.913 GSM1160122,0,35.642 GSM1160123,0,73.875 GSM1160124,0,87.075 GSM1160125,0,39.38 GSM1160126,0,29.43 GSM1160127,0,99.132 GSM1160128,0,48.223 GSM1160129,0,104.854 GSM1160130,0,83.789 GSM1160131,0,68.306 GSM1160132,0,14.311 GSM1160133,0,41.603 GSM1160134,0,41.318 GSM1160135,0,277.455 GSM1160136,0,341.207 GSM1160138,0,187.488 GSM1160139,0,342.747 GSM1160140,0,221.475 GSM1160112,0,297.922 GSM1160113,0,504.104 GSM1160114,0,314.482 GSM1160115,0,403.941 GSM1160116,0,580.921 GSM1160117,0,604.583 GSM1160118,0,309.16 GSM1160119,0,248.101
| Synonyms | C6orf28;G7B;YBL026W;snRNP |
| Description | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
|---|---|
| Chromosome | 6p21.3 |
| Database Reference | MIM:607282 HGNC:13940 HPRD:06282 Vega:OTTHUMG00000031121 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE44183 |
| LSM2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| 2-cell blastomere | 35.642 | 75.373 | 76.913 |
| 4-cell blastomere | 29.43 | 56.628 | 87.075 |
| 8-cell blastomere | 14.311 | 76.047 | 341.207 |
| morula | 187.488 | 221.475 | 342.747 |
| oocyte | 297.922 | 314.482 | 504.104 |
| pronucleus | 403.941 | 580.921 | 604.583 |
| zygote | 248.101 | 278.631 | 309.16 |
| Comparing LSM2 expression between groups | FDR |
|---|---|
| 2-cell blastomere VS 4-cell blastomere | NS |
| 2-cell blastomere VS 8-cell blastomere | NS |
| 2-cell blastomere VS morula | NS |
| 2-cell blastomere VS oocyte | NS |
| 2-cell blastomere VS pronucleus | NS |
| 2-cell blastomere VS zygote | NS |
| 4-cell blastomere VS 8-cell blastomere | NS |
| 4-cell blastomere VS morula | 0.0400824277000286 |
| 4-cell blastomere VS oocyte | 0.0226873901181008 |
| 4-cell blastomere VS pronucleus | 0.0134352251516268 |
| 4-cell blastomere VS zygote | 0.0444092473119896 |
| 8-cell blastomere VS morula | NS |
| 8-cell blastomere VS oocyte | NS |
| 8-cell blastomere VS pronucleus | NS |
| 8-cell blastomere VS zygote | NS |
| morula VS oocyte | NS |
| morula VS pronucleus | NS |
| morula VS zygote | NS |
| oocyte VS pronucleus | NS |
| oocyte VS zygote | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others 2-cell blastomere[3]
4-cell blastomere[4]
8-cell blastomere[10]
morula[3]
oocyte[3]
pronucleus[3]
zygote[2]
