gene,0,0 GSM1833288,0,34.56 GSM1833289,0,29.349 GSM1833290,0,52.539 GSM1833291,0,47.529 GSM1833292,0,113.255 GSM1833294,0,99.331 GSM1833295,0,246.75 GSM1833296,0,362.241 GSM1833297,0,308.341 GSM1833298,0,302.543 GSM1833300,0,411.639 GSM1833302,0,341.043 GSM1833304,0,351.817 GSM1833316,0,478.127 GSM1833318,0,476.666 GSM1833321,0,492.42 GSM1833329,0,283.835 GSM1833330,0,313.44 GSM1833331,0,235.86 GSM1833326,0,313.333 GSM1833327,0,230.585 GSM1833328,0,319.985 GSM1833323,0,419.702 GSM1833324,0,175.843 GSM1833325,0,293.112 GSM1833279,0,28.694 GSM1833280,0,33.188 GSM1833281,0,41.83 GSM1833282,0,14.138 GSM1833307,0,417.281 GSM1833309,0,388.527 GSM1833312,0,439.186 GSM1833314,0,409.037 GSM1985628,0,222.295 GSM1985629,0,222.069 GSM1985630,0,210.393 GSM1985631,0,135.507 GSM2151860,0,197.618 GSM2151861,0,251.129 GSM2151862,0,196.169 GSM1833332,0,311.814 GSM1833333,0,229.083 GSM1833334,0,181.931 GSM1833283,0,27.799 GSM1833284,0,47.869 GSM1833285,0,45.751 GSM1833286,0,31.604 GSM1833287,0,37.379
| Synonyms | C6orf28;G7B;YBL026W;snRNP |
| Description | LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated |
|---|---|
| Chromosome | 6p21.3 |
| Database Reference | MIM:607282 HGNC:13940 HPRD:06282 Vega:OTTHUMG00000031121 |
| See related | THE HUMAN PROTEIN ATLAS |
| Dataset | GSE71318 |
| LSM2 expression in each cell group | Minimum Value (TPM) | Median Value (TPM) | Maximum Value (TPM) |
|---|---|---|---|
| human 2 cell | 29.349 | 41.044 | 52.539 |
| human 4 cell | 99.331 | 180.002 | 362.241 |
| human 8 cell | 302.543 | 341.043 | 411.639 |
| human early blastocsyt | 476.666 | 478.127 | 492.42 |
| human ICM | 235.86 | 283.835 | 313.44 |
| human late blastoycst | 230.585 | 313.333 | 319.985 |
| human middle blastocyst | 175.843 | 293.112 | 419.702 |
| human MII oocyte | 14.138 | 30.941 | 41.83 |
| human morula | 388.527 | 413.159 | 439.186 |
| human stem cells | 135.507 | 210.393 | 251.129 |
| human TE | 181.931 | 229.083 | 311.814 |
| human zygote | 27.799 | 37.379 | 47.869 |
| Comparing LSM2 expression between groups | FDR |
|---|---|
| human 2 cell VS human 4 cell | 0.0422640905567745 |
| human 2 cell VS human 8 cell | 0.00112466282202755 |
| human 2 cell VS human ICM | 0.00407972980949894 |
| human 2 cell VS human MII oocyte | NS |
| human 2 cell VS human TE | 0.00903711386033729 |
| human 2 cell VS human early blastocsyt | 0.00467642070654502 |
| human 2 cell VS human late blastoycst | 0.00649788623149953 |
| human 2 cell VS human middle blastocyst | 0.0130850744014635 |
| human 2 cell VS human morula | 0.000486924983215658 |
| human 2 cell VS human stem cells | 0.000110014432349642 |
| human 2 cell VS human zygote | NS |
| human 4 cell VS human 8 cell | NS |
| human 4 cell VS human ICM | NS |
| human 4 cell VS human MII oocyte | 0.0285911616571402 |
| human 4 cell VS human TE | NS |
| human 4 cell VS human early blastocsyt | NS |
| human 4 cell VS human late blastoycst | NS |
| human 4 cell VS human middle blastocyst | NS |
| human 4 cell VS human morula | NS |
| human 4 cell VS human stem cells | NS |
Top correlated genes were calculated by using Spearman rank correlation. Enrichment analysis can be performed on DAVID server using its API, while alternative links are also provided.
KEGG GO Others human 2 cell[4]
human 4 cell[4]
human 8 cell[5]
human early blastocsyt[3]
human ICM[3]
human late blastoycst[3]
human middle blastocyst[3]
human MII oocyte[4]
human morula[4]
human stem cells[7]
human TE[3]
human zygote[5]
